Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4968 |
Symbol | |
ID | 5192700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5589205 |
End bp | 5590023 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640589453 |
Product | pyrroline-5-carboxylate reductase |
Protein accession | YP_001270272 |
Protein GI | 148550170 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGA CACGTATTGC CTTTATCGGC GCCGGCAACA TGGCCGCCAG CCTGATCGGT GGTCTGCGTG CCCAGGGCCT GGACGCCTCG CAGATCCGCG CCAGCGACCC GGGCGCCGAG ACCCGCAGTC GCATCCAGGC CGAGCACGGC ATTGAAGCCT TCGAGGACAA CGCCCAGGCC ATCGATGGCG CTGACGTCAT CGTGCTGGCG GTCAAGCCAC AAGTCATGAA AACCGTATGT CAGGCACTGC AACCCAACCT GCAGGATGGC CAGCTGATCG TTTCAATCGC CGCCGGCATC ACGTGCGCCA GCCTGCAAAG CTGGGTGGGC GCTCGCCCGG TGGTGCGCTG CATGCCCAAC ACCCCGGCAT TGCTGCGCCA AGGCGTGAGC GGCCTGTACG CCACCGCTGA AGTGTCCGGC GAACAGCGTC AGCAGGCCGA ACAACTGCTG TCGGCCGTGG GCACCGCCCT GTGGCTGGAG CAGGAACAGC AACTGGACGC CGTGACAGCT GTGTCCGGCA GTGGCCCGGC ATACTTCTTC CTGCTGATCG AGGCCATGAC CGCGGCAGGC GAAAAACTCG GCCTGCCACG CGAAACGGCC TCCCAACTGA CCTTGCAGAC GGCCCTGGGC GCCGCGCGCA TGGCAGTTGC AAGCGATGTC GATGCCGCTG AACTGCGCCG CCGCGTCACT TCGCCCGCCG GCACCACGGA AGCGGCGATC AAGTCGTTCC AGGCCAGCGG CTTCGAAGCC ATCGTCGAGC AGGCGCTGCA GGCTGCAGCC ACGCGCTCCG CCGAGCTGGC CGAACAACTG GGCAAATAA
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Protein sequence | MSKTRIAFIG AGNMAASLIG GLRAQGLDAS QIRASDPGAE TRSRIQAEHG IEAFEDNAQA IDGADVIVLA VKPQVMKTVC QALQPNLQDG QLIVSIAAGI TCASLQSWVG ARPVVRCMPN TPALLRQGVS GLYATAEVSG EQRQQAEQLL SAVGTALWLE QEQQLDAVTA VSGSGPAYFF LLIEAMTAAG EKLGLPRETA SQLTLQTALG AARMAVASDV DAAELRRRVT SPAGTTEAAI KSFQASGFEA IVEQALQAAA TRSAELAEQL GK
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