| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4967 |
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| Symbol | |
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| ID | 5193219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5588480 |
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| End bp | 5589166 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589452 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001270271 |
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| Protein GI | 148550169 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCC TAGCAGACAA CCTTTCCGCG ATTTCCGCCC GTATCGCCAG TGCTGCCCAG
GCAGTCGGGC GTGATCCGGC CAGCGTCCAG TTGCTGGCCG TGAGCAAGAC CAAGCCCGCC
AGCGCTATCC GCGAGATCCA TGCCGCCGGC GTTCGCGACT TCGGGGAGAA TTACCTACAG
GAAGCACTGA CAAAGCAGCA GGCCCTCAGC GACTTGCCCT TGATCTGGCA CTTCATCGGC
CCCATTCAGT CGAACAAGAC CAAAGCCATC GCCGAGCATT TCGACTGGGT GCATTCCGTG
GACCGCCTGA AAATTGCCCA ACGCCTGTCG GAACAGCGCC CTGCCGGGTT GGCGCCGCTG
AACATCTGCC TGCAGGTCAA CGTCAGCGGC GAAGACAGTA AATCCGGCTG CACCCCGGCC
GACCTACCCG CGTTGGCCAA AGCCGTAGCC GCACTGCCCA ACCTGCGCCT GCGCGGGCTG
ATGGCAATCC CGAAACCCAC CGAAGACCGC GCCACCCAGG AGGCCGCCTT CGCCAGCCTG
CGCAAGTTGC AGGAAGGCCT GGGGTTTGGC CTGGACACCC TGTCCATGGG CATGAGCCAC
GACCTGGAAG CGGCTATCGC CCAGGGCGCG ACGTGGGTAC GAATTGGCAC GGCCCTGTTC
GGCGCCCGCG ACTACGGCAA CACCTGA
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| Protein sequence | MSTLADNLSA ISARIASAAQ AVGRDPASVQ LLAVSKTKPA SAIREIHAAG VRDFGENYLQ
EALTKQQALS DLPLIWHFIG PIQSNKTKAI AEHFDWVHSV DRLKIAQRLS EQRPAGLAPL
NICLQVNVSG EDSKSGCTPA DLPALAKAVA ALPNLRLRGL MAIPKPTEDR ATQEAAFASL
RKLQEGLGFG LDTLSMGMSH DLEAAIAQGA TWVRIGTALF GARDYGNT
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