Gene Pput_4960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4960 
Symbol 
ID5191893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5580757 
End bp5581059 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content54% 
IMG OID640589445 
Productribosomal protein L31 
Protein accessionYP_001270264 
Protein GI148550162 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0254] Ribosomal protein L31 
TIGRFAM ID[TIGR00105] ribosomal protein L31 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGCTCTG GTATTATTCG CCGCCTAATT ACGTGCGGTA TTCAACAATT GGTGTTGGGT 
GGCGGCACGC AGCTCGAGGA AGTGACCATG AAAGAAGGTA TCCACCCGAA CTACGAAGTA
GTTGCAGTCA CCTGCAGCTG CGGTAACAAG TTCGAAACTC GTTCGACCCT GGGCAACGTC
CTGTCGATCG ACGTTTGCAA CCTGTGCCAC CCGTTCTACA CCGGTAAGCA GAAAGTTCTG
GACACCGGTG GTCGCGTACA GAAGTTCGCC GATCGCTTCG GCATGTTCGG TGCCAAGAAG
TAA
 
Protein sequence
MCSGIIRRLI TCGIQQLVLG GGTQLEEVTM KEGIHPNYEV VAVTCSCGNK FETRSTLGNV 
LSIDVCNLCH PFYTGKQKVL DTGGRVQKFA DRFGMFGAKK