Gene Pput_4920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4920 
Symbol 
ID5190880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5523424 
End bp5524830 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content59% 
IMG OID640589405 
Productglutamine synthetase, type I 
Protein accessionYP_001270224 
Protein GI148550122 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGT CGGTTCAACT CATCAAAGAT CATGACGTCA AGTGGATTGA TCTGCGTTTC 
ACGGACACCA AAGGCATTCA GCACCACGTG ACCATGCCGT CGCGTGATGC GCTGGACGAA
GACTTCTTCG AAGTCGGCAA GATGTTCGAC GGTTCCTCCA TCGCTGGCTG GAAAGGCATC
GAAGCTTCCG ACATGATCCT GATGCCGGTC GACGAAACCG CCGTTCTGGA CCCGTTCACC
GAAGAACCTA CCCTGATCAT CACCTGCGAC ATCGTCGACC CGTCGAGCAT GCAGGGCTAC
GATCGCGACC CACGCGCCAT CGCCAAGCGC GCTGAAGAGT ACCTGAAGAG CACCGGCATC
GGTGACACCG TATTCGCCGG CCCAGAGCCT GAGTTCTTCA TCTTCGACGA AGTGAAGTTC
CACTCGGACA TCTCCGGTTC GATGTTCAAG ATCTTCTCCG AGCAGGGCTC GTGGATGACC
GGCGCTGACG TGGAAGGCGG CAACAAAGGC CACCGCCCGG GCGTGAAAGG CGGCTACTTC
CCGGTTCCGC CGTTCGACCA CGACCACGAA ATCCGTACTG CCATGTGCAA CGCTCTGGAA
GAAATGGGCC AGACCGTTGA AGTTCACCAC CACGAAGTGG CGACTGCCGG CCAGAACGAA
ATCGGCGTCA AGTTCAACAC CCTGGTGAAG AAGGCTGACG AAGTACAAGC GCTGAAATAC
GTCGTGCACA ACGTTGCCGA CGCTTACGGC CGTACCGCCA CCTTCATGCC GAAGCCACTT
TACGGCGACA ACGGCTCGGG CATGCACGTG CACATGTCGA TCTGGAAAGA CGGCAAGAAC
ACCTTCTCGG GTGAAGGCTA TGCCGGCCTG TCCGACACCG CCCTGTACTT CATTGGCGGT
ATCATCAAGC ACGGTAAGGC CCTGAACGGC TTCACCAACC CGTCGACCAA CTCGTACAAG
CGTCTGGTCC CAGGCTTCGA AGCCCCGGTA ATGCTGGCCT ACTCGGCTCG CAACCGTTCC
GCCTCGATCC GTATTCCTTA CGTTGGCAGC CCGAAAGCCC GCCGTATCGA AGCACGCTTC
CCGGACCCAT CGGCCAACCC GTACCTGGCC TTCGCGGCCC TGCTGATGGC TGGCCTGGAC
GGCATCCAGA ACAAGATCCA CCCAGGCGAC GCGGCCGACA AGAACCTGTA CGACCTGCCG
CCAGAAGAAG CCAAGAACAT CCCGCAAGTG TGCGGCAGCC TGAAAGAAGC TCTGGAAGAG
CTGGATAAAG GCCGTGCGTT CCTGACCAAG GGCGGCGTGT TCTCCGATGA CTTCATCGAT
GCCTTCATCG AGCTGAAGAG CGAAGAAGAA ATCAAGGTCC GTACCTTCGT ACACCCGCTG
GAATACGAGC TGTACTACAG CTGCTGA
 
Protein sequence
MSKSVQLIKD HDVKWIDLRF TDTKGIQHHV TMPSRDALDE DFFEVGKMFD GSSIAGWKGI 
EASDMILMPV DETAVLDPFT EEPTLIITCD IVDPSSMQGY DRDPRAIAKR AEEYLKSTGI
GDTVFAGPEP EFFIFDEVKF HSDISGSMFK IFSEQGSWMT GADVEGGNKG HRPGVKGGYF
PVPPFDHDHE IRTAMCNALE EMGQTVEVHH HEVATAGQNE IGVKFNTLVK KADEVQALKY
VVHNVADAYG RTATFMPKPL YGDNGSGMHV HMSIWKDGKN TFSGEGYAGL SDTALYFIGG
IIKHGKALNG FTNPSTNSYK RLVPGFEAPV MLAYSARNRS ASIRIPYVGS PKARRIEARF
PDPSANPYLA FAALLMAGLD GIQNKIHPGD AADKNLYDLP PEEAKNIPQV CGSLKEALEE
LDKGRAFLTK GGVFSDDFID AFIELKSEEE IKVRTFVHPL EYELYYSC