| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4909 |
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| Symbol | |
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| ID | 5190662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5509551 |
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| End bp | 5510297 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589394 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001270213 |
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| Protein GI | 148550111 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.429713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCCGACAC CTCCTGTCTC CGTGCTGGTT GCCCAGATGG GCGAGGGCCC GGCGCCGCTC
TACGCCCGGG TCAAACAGAT GATCATCCAG CAGATCGACA ACGGCAGCTG GCCACCGCAT
CACCGGGTAC CTTCCGAGAG CGAGTTGGTC AACGAGCTGG GTTTCAGCCG CATGACCATC
AACCGCGCCC TGCGTGAACT CACCGCCGAG GGCCTGCTGG TGCGCATGCA AGGGGTCGGC
ACCTTCGTGG CCGAGCCCAA GGGCCGTTCG GCGCTGTTCG AGGTCAACAA CATTGCCGAT
GAAATTGCCG CGCGCGGGCA CCAGCATAGC TGCCAGGTGA TCACGCTTGC CGAAGAAGCG
GCCGGCTCCG AGCGGGCGCT GGCTCTGGAC ATGCGTGAAG GTCAGCGGGT GTTCCATTCG
CTGATCGTGC ATTTCGAGAA CGGCGTGCCT GTGCAGATCG AGGACCGCTA CGTTAACGCG
GCCATCGCCC CCGACTACCT CAAGCAGGAC TTTACTCGGC AGACGCCTTA CGCCTACCTG
TCCCAGGTGG CGCCGTTGAC CGAAGGTGAG CATGTGGTCG AGGCGATCCT GGCCGAGCCG
GAAGAATGCC GCCTGTTGCA GATCGAGCGG GGCGAGCCTT GCCTGCTGAT TCGTCGTCGC
ACCTGGTCCG GCCGCCAGCC GGTGACCGCT GCACGGCTGA TCCACCCCGG TTCCCGTCAT
CGCCTGGAAG GACGTTTCAG CAAATGA
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| Protein sequence | MPTPPVSVLV AQMGEGPAPL YARVKQMIIQ QIDNGSWPPH HRVPSESELV NELGFSRMTI
NRALRELTAE GLLVRMQGVG TFVAEPKGRS ALFEVNNIAD EIAARGHQHS CQVITLAEEA
AGSERALALD MREGQRVFHS LIVHFENGVP VQIEDRYVNA AIAPDYLKQD FTRQTPYAYL
SQVAPLTEGE HVVEAILAEP EECRLLQIER GEPCLLIRRR TWSGRQPVTA ARLIHPGSRH
RLEGRFSK
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