Gene Pput_4908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4908 
Symbol 
ID5190661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5508982 
End bp5509554 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content61% 
IMG OID640589393 
Producthypothetical protein 
Protein accessionYP_001270212 
Protein GI148550110 
COG category[S] Function unknown 
COG ID[COG3758] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.565857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGC TGCAGTTGTT GCGTGCGCAC GATTACCCGC GCATGCCGTG GAAGAACGGT 
GGCGGTTTCA CCGAAGAGAT TACCCGCGAC AGTGGCGAGG GCCTGGACAG TTTTGGCTGG
CGTCTGTCGA TTGCCGATAT CGAAGAGTCG GGCGGCTTTT CCACCTTCGC CGGCTACCAG
CGGATCATCA CCGTGCTGCA GGGCGACGGC ATGCGCCTGC TGGTCGACGG CCAGGCCAGT
CGGCCATTGC TGGCGTTCGA TGCGTTTGCG TTCAGCGGCG AGAGCCAGGT CAGCTGCAAG
TTGCTGGGCG GGGCGATCCG CGATTTCAAC CTGATCTATG CACCTGAGCG TTATCGGGCG
CGGCTGCAGT GGCTGGATGG CACCAGCCGG GTGTACAGCT CGGCGTCGAC GGTGTTGTTG
TTTGCTGCCA GCAGCCATGT TGAGGTGACC ATCGTGGGGC GTGAAACGCA GCGGCTAGGG
TTGTATGACT GCCTGCGGCT GGAGGGCAAT GACGAATTGC TTGGGCTGGA GGTTCAGGGG
CGGTTTTGCT TGATTGAGCT CATTTCTCGC TGA
 
Protein sequence
MSQLQLLRAH DYPRMPWKNG GGFTEEITRD SGEGLDSFGW RLSIADIEES GGFSTFAGYQ 
RIITVLQGDG MRLLVDGQAS RPLLAFDAFA FSGESQVSCK LLGGAIRDFN LIYAPERYRA
RLQWLDGTSR VYSSASTVLL FAASSHVEVT IVGRETQRLG LYDCLRLEGN DELLGLEVQG
RFCLIELISR