Gene Pput_4904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4904 
Symbol 
ID5193037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5502642 
End bp5503847 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content67% 
IMG OID640589389 
Productimidazolonepropionase 
Protein accessionYP_001270208 
Protein GI148550106 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID[TIGR01224] imidazolonepropionase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACCC TCTGGCAGCA TTGCCATGTT GCAACCATGG CCGATGGCCG TTACTCGGCC 
ATCGAGGACG CGGCGATCGT CACCAGCGCC GGGCTGATCG AGTGGATAGG CCCGCGCGCC
GAACTGGCAC CGGTCGAAGC TGACCGCACG GTTGACCTGG GGGGGGCCTG GGTCACCCCC
GGGCTGATCG ACTGCCACAC CCATGCGGTG TTCGGTGGCA ACCGCAGCGG CGAGTTCGAG
CAGCGCCTGC AGGGCGTGAG CTATGCCGAA ATCGCCGCGC AGGGCGGGGG TATCGCGAGT
ACCGTGCGGG CTACCCGGGC GGCAAGCGAA GACGAGCTGT TCGCCAGTGC TCGCCAGCGC
GTTCAGGCAT TGATGCGCGA TGGCGTGACC ACCCTCGAGG TCAAGTCCGG CTACGGCCTG
GACTTGGCCA ATGAGCGCAA GATGCTGCGA GTGGCCCGGC GCCTGGCCGA CGAGCTGCCG
CTGACGGTGC GTGCCACGTG CCTGGCGGCG CACGCTTTGC CCCCGGAGTA CGCGGGTCGG
GCCGACGACT ACATCGCGCA CATCTGTGAC GAAATGTTGC CGGCCCTGGC CGGCGAAGGC
CTGGTGGATG CGGTGGATGC CTTCTGCGAA CACCTCGCGT TCTCGCCGGC CCAGGTCGAG
CGGCTGTTCA TCAAGGCGCG CGAACTGGGC CTGCCGGTCA AGCTGCATGC CGAACAGCTG
TCATCGTTGC ACGGCTCAAG CCTGGCCGCG CGTTACCAGG CACTGTCGGC TGACCACCTG
GAGTTCATGA CAGAGGAAGA CGCCGTGGCC ATGGCAAACG CCGGCACGGT CGCCGTGCTG
TTACCGGGTG CTTTCTACTT CCTGCGTGAA ACCCAGCTGC CGCCAATGGA TGCATTGCGC
CGCCACGGGG TAAAGATTGC CCTGGCCAGC GACCTCAACC CCGGCACCTC GCCAGGCTTG
TCGCTGCGGT TGATGCTGAA CATGGGCTGC ACCTGCTTCC GCATGACACC GGAAGAGGCC
CTGGCAGGCG TTACGGTGCA CGCCGCCACG GCGCTGGGCC TGGGTGACAG TCACGGCTCG
CTGCAAGTGG GCAAGGTGGC CGACTTCGTT GCCTGGCAAA TCGAACGCCC CGCCGACCTG
GCCTACTGGC TGGGTGGCGA CCTGCCCAAG CGCGTAGTGC GCATGGGCCA CGAAATCTCC
AACTGA
 
Protein sequence
MRTLWQHCHV ATMADGRYSA IEDAAIVTSA GLIEWIGPRA ELAPVEADRT VDLGGAWVTP 
GLIDCHTHAV FGGNRSGEFE QRLQGVSYAE IAAQGGGIAS TVRATRAASE DELFASARQR
VQALMRDGVT TLEVKSGYGL DLANERKMLR VARRLADELP LTVRATCLAA HALPPEYAGR
ADDYIAHICD EMLPALAGEG LVDAVDAFCE HLAFSPAQVE RLFIKARELG LPVKLHAEQL
SSLHGSSLAA RYQALSADHL EFMTEEDAVA MANAGTVAVL LPGAFYFLRE TQLPPMDALR
RHGVKIALAS DLNPGTSPGL SLRLMLNMGC TCFRMTPEEA LAGVTVHAAT ALGLGDSHGS
LQVGKVADFV AWQIERPADL AYWLGGDLPK RVVRMGHEIS N