Gene Pput_4900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4900 
SymbolmdoG 
ID5195124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5498250 
End bp5499989 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content62% 
IMG OID640589385 
Productglucan biosynthesis protein G 
Protein accessionYP_001270204 
Protein GI148550102 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3131] Periplasmic glucans biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.766057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGTTA GTCCCCAAAA AGCATCAAGA ATCCCCAGCG TCGGGCTACG CAAGGCGCTG 
ATGGCCAGTG TGGCTCTGGT CGGCCTGATG AGCGCGGGCC AGCTGTGGGC ATTCAATCTT
GACGATGTTG CTGCCAAGGC AAAGGATCTG GCCGGCCAGA AGTACGACGC GCCCAAAAGC
AACCTGCCGG CCGTGTTCCG CGACATGAAG TTCGCGGACT ACCAGAAAAT CCGTTTCCTG
CAGGAAAAGG CCGAGTGGGC CAAGGACAAG ACCCCGTTCA AACTGTCGTT CTATCATCAG
GGCATGCACT TCGACACCCC GGTGAAAATC AACGAGGTCA CCGCCACCAA GGTCGAGGAA
ATCAAGTACG ACCCGGACCG CTTCGAGTTC GGTGACGTGC CGCACGACCC GGAAACCACC
AAAAACCTCG GTTATGCCGG TTTCCGCGTG CTGTATCCGA TCAACAAGGC CGACAAGCAG
GACGAGATCA TGACCCTGCT TGGCGCCAGC TATTTCCGCG TAGTCGGCAA GGGCCACGTG
TACGGTCTGT CTGCCCGTGG CCTGGCCATC GACACCGCCC TGCCGTCGGG CGAAGAATTC
CCGCGCTTCA CCGAGTTCTG GGTTGAAAAG CCCAAGCCAG CCGACAAGCA CCTGGTGATC
TACGCGCTGC TGGATTCGCC GCGCTCTACC GGCGCCTACA AGCTGACCTT GCGTCCAGGC
AACGACACCG TGGTCGACGT GCAGTCCCGC GTGTTCCTGC GTGACCATGT CAGCCGCCTG
GGCATTGCGC CGCTGACCAG CATGTACCTG TTCGGCCCCA ACCAGCCGTC CAAGGTGCTC
AACTACCGCC CGGCCCTGCA TGACTCCGAA GGCCTGTCGA TCCATGCCGG CAACGGCGAG
TGGCTGTGGC GCCCGCTGAA CAACCCGAAA CACCTGGCTG TAAGTAACTT CAGCGTCGAG
AACCCGCGTG GTTTCGGCCT GATGCAGCGT CAGCGTGCTT TCAGCGACTA CGAAGACCTC
GACGACAACT ACCAGAAGCG CCCAAGCGCC TGGATCGAGC CGAAGGGTGA CTGGGGCAAG
GGTAGCGTCG ACCTGGTCGA AATCCCGACC GCCGATGAGA CCAACGACAA TATCGTGGCC
TTCTGGAGCC CGGAGAAACT GCCGGAGCCA GGTAAGCCGT TCGAGTACGC CTACCGCCTG
CACTGGACCA TCGACGAGCC GAAGTTCCAG GCCCCTGACC TGGGCTCGGT CAAGCAGACC
CTGCGTTCCA CGGGTGACGT CAAGCAGTCC AACCTGATCC GCCAGCCAGA TGGCAGCGTG
GCATTCCTGG TCGACTTCGC CGGCCCGGCG CTTGCCGCCC TGCCGGAAGA CACCGCCGTG
CGCAGCCAGA TCAGCGTGGG CGACAACGCC GAGGTGGTCG AGAACAATTT GCGCTATAAC
CCTGAGACCA AGGGCTGGCG CCTGACCCTG CGCCTGAAGG TCAAGGAAGC CAACAAGTCG
ACCGAAATGC GCGCCGCACT GGTGCGTGAT GTACCGGTCG AGCCCGCCAA GCCTGCCCAG
GACGCCAAGC AGGACAAAGC CGCAGCCAAG CATGCCAAGG CCGAGAAAGC CGTCAAGGCT
GAGCAATCTG CCAAGGCCGA ACAACCTGCC GCCGATGCGG CGCCCACCAA CGGGGCCCCG
GCCACCACCG AGAAGGTGCT GACCGAGACC TGGAGCTATC AGTTGCCTGC CGATGAGTAA
 
Protein sequence
MIVSPQKASR IPSVGLRKAL MASVALVGLM SAGQLWAFNL DDVAAKAKDL AGQKYDAPKS 
NLPAVFRDMK FADYQKIRFL QEKAEWAKDK TPFKLSFYHQ GMHFDTPVKI NEVTATKVEE
IKYDPDRFEF GDVPHDPETT KNLGYAGFRV LYPINKADKQ DEIMTLLGAS YFRVVGKGHV
YGLSARGLAI DTALPSGEEF PRFTEFWVEK PKPADKHLVI YALLDSPRST GAYKLTLRPG
NDTVVDVQSR VFLRDHVSRL GIAPLTSMYL FGPNQPSKVL NYRPALHDSE GLSIHAGNGE
WLWRPLNNPK HLAVSNFSVE NPRGFGLMQR QRAFSDYEDL DDNYQKRPSA WIEPKGDWGK
GSVDLVEIPT ADETNDNIVA FWSPEKLPEP GKPFEYAYRL HWTIDEPKFQ APDLGSVKQT
LRSTGDVKQS NLIRQPDGSV AFLVDFAGPA LAALPEDTAV RSQISVGDNA EVVENNLRYN
PETKGWRLTL RLKVKEANKS TEMRAALVRD VPVEPAKPAQ DAKQDKAAAK HAKAEKAVKA
EQSAKAEQPA ADAAPTNGAP ATTEKVLTET WSYQLPADE