Gene Pput_4895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4895 
Symbol 
ID5194369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5490448 
End bp5492667 
Gene Length2220 bp 
Protein Length739 aa 
Translation table11 
GC content62% 
IMG OID640589380 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001270199 
Protein GI148550097 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.247309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCGGC CCTGCTGGCC AATTTCCACC CGCCGTTCAC CGTTGCCGGC ACTACCGTAT 
TCGCGGGTAA ACCCGCGCCT ACACACATGC ATAGGCTGTC GTAGGAGCGG GTTTACCCGC
GAAGAGGACG GCACAGGACG AAATATATCC TACTGTTCGC GGCGAACTTT CCTACCTGAT
TATCAGGTCA AGTCCTACAG CTCCACTGCC GATGGGCAGA GATGTGATGC CAGCCATGCG
CCTGCATCCT TTCTCTCACT CGCTCGGAGA TTCCCCATGC TTGGCTCCCT CAACCGCAAG
CTCGGCAACA TCAGTGTCGC CGCCAAGCTG GCCCTCGGCT TCGCCGTGGT CCTGCTGCTC
ACCCTGGCCA CCACCATCAG CGGCTGGCGT GCCCTGGATG GTGCCATCGT GCGCTCACAG
CAACTCAGCG AAATAGGCCT GATCAACGAC CTGACAAAAG ACCTGCGCGC GGAACGCATC
ACCTACCGCG TGCTCAACGA CGATGCCAGC AGAGCACGCA TCAGCAATAT CCTCGACCAG
CTCAACAGCA TGCTGACCAC CCTGCAACAA CGCAGCAACG TCGATGAGTC ACGGCAGTTG
CTGACAGAGA AAATGGCATT GTTGCAGAGC CTGCGCGACA CCTTCAGCGA ACTGCAGCGC
AGCGTCGCCA GCCGTGTAGC CCTGCGCGAA GCCCTGCAGT CACAGGAGCA TGCACTCAGC
GAGGCGATTG ACCAACTGCA GACCCAGGCC TTGCTGAAAA TGCCTGACAA CAGTCAGCAA
AGTGGTGTGC TGGGCCTGAT GGATACCCTC AGCCGGCATG TCGAAGGTGC CAACCAGCAA
AGCCTGGTTC CAGCCTACAC CTTCGCCCCG GTCGAGGATT TTTCCAAAGT CGGTGATAAC
GCCCTGGATG CCGCCGACAA TAGCCTTGCG CAACTGCTTG AAGGCCTTGC GCCGTTGGGC
TTGCCACGCG CCATCACTGA GCAACCGGGT GTCGAGCTGA GCAAGTACCG CACCAGCCTG
GATCAGTACC GCCGCGCCGC CGTACGTGTG GAGCAGTTGC AGAACAACAT GGAAAACATG
GGCAACGAGC TGCGAACGGT GAGCCTCGAA CTGGGCAAAC GCAAGGTCGA ACAACGCGAC
AGTGAGGCCG TGGCCGCCCG GTCGCTGCTG ACCAGTGTGG CGCTGCTGGC CATGGTGGTA
GGGGCGCTGG CCGCCTGGCT GATCACCTTG CAGATCACCC AGCCGTTGCG CCAGACACTG
GCCGTGGCTG CCCGCATCGC CAAGGGTGAC CTGAGCCAGG TCGACAGCGT GCAACGTCGC
GACGAAATGG GCCAGCTGCA AACCAGCATG CGCGAGATGA CCTTGAGCCT GCGCGAGCTG
ATCGGTGGCA TTGATCAGGG TGTCGGCCAG CTGTCACAGG CCGCCACACA GTTGGCGGCC
AGTAGCGAAG ACACCAAGCT GCGCATCAAT CAGCAGCGCG AGGAAACTGA CCAGGTGGCG
ACTGCCATGA ACCAGATGAG CGCCACCGTG CAGGAAGTGG CACAGAACGC CGAGCAAGCC
TCGCTGGCCG CGACCAGCGC TGACCAGCAG GCACAGGTGG GTGACCAGGT CGTCGCCGAA
GCCATCGGCC GTATCGAACA GCTGGCCGGG CAGATGGACC ATTGCCTGGC GGCCATGCAG
CACCTGGCAG GCGAGAGCCA GCGGATTGGC AGCATTCTCG ATGTGATCAA GTCGGTGTCC
GAACAGACCA ACCTGTTGGC GCTGAACGCA GCGATCGAAG CGGCACGGGC TGGTGAAGCC
GGGCGCGGCT TTGCCGTGGT GGCCGATGAG GTGCGTGGCC TGGCACAGCG CACGTCGACG
GCGACCGAAG AGATCGGCCA ACTGATCGAC AGTCTGCACA ACGGTACCGA CGAAGTGACC
CGCTTGCTGG ACAGCAGCAA GAGCCTGACC GAACAGAGCG TGGAGCTGAG CCGCAGGGCC
GGGCACGCAC TGAGCCAGAT CACCGACACG GTATCGAGCA TTCAGGGCAT GAACCAACAG
ATCGCCACCG CCAGTGAAGA GCAGAGCGTG GTGGCCGAGC AGATCAACCG AAGTGTGATC
AATGTGCGGG ATGTTTCGGA TCAGACCAGC GCGGCCAGTG AGCAGACGGC AGCCTCGAGT
GGAGAACTGG AGCATCTGGG GCAGCAATTG CGGGGGATGG TGGGGCGGTT CAGCCTCTGA
 
Protein sequence
MGRPCWPIST RRSPLPALPY SRVNPRLHTC IGCRRSGFTR EEDGTGRNIS YCSRRTFLPD 
YQVKSYSSTA DGQRCDASHA PASFLSLARR FPMLGSLNRK LGNISVAAKL ALGFAVVLLL
TLATTISGWR ALDGAIVRSQ QLSEIGLIND LTKDLRAERI TYRVLNDDAS RARISNILDQ
LNSMLTTLQQ RSNVDESRQL LTEKMALLQS LRDTFSELQR SVASRVALRE ALQSQEHALS
EAIDQLQTQA LLKMPDNSQQ SGVLGLMDTL SRHVEGANQQ SLVPAYTFAP VEDFSKVGDN
ALDAADNSLA QLLEGLAPLG LPRAITEQPG VELSKYRTSL DQYRRAAVRV EQLQNNMENM
GNELRTVSLE LGKRKVEQRD SEAVAARSLL TSVALLAMVV GALAAWLITL QITQPLRQTL
AVAARIAKGD LSQVDSVQRR DEMGQLQTSM REMTLSLREL IGGIDQGVGQ LSQAATQLAA
SSEDTKLRIN QQREETDQVA TAMNQMSATV QEVAQNAEQA SLAATSADQQ AQVGDQVVAE
AIGRIEQLAG QMDHCLAAMQ HLAGESQRIG SILDVIKSVS EQTNLLALNA AIEAARAGEA
GRGFAVVADE VRGLAQRTST ATEEIGQLID SLHNGTDEVT RLLDSSKSLT EQSVELSRRA
GHALSQITDT VSSIQGMNQQ IATASEEQSV VAEQINRSVI NVRDVSDQTS AASEQTAASS
GELEHLGQQL RGMVGRFSL