Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4895 |
Symbol | |
ID | 5194369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5490448 |
End bp | 5492667 |
Gene Length | 2220 bp |
Protein Length | 739 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640589380 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001270199 |
Protein GI | 148550097 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.247309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCGGC CCTGCTGGCC AATTTCCACC CGCCGTTCAC CGTTGCCGGC ACTACCGTAT TCGCGGGTAA ACCCGCGCCT ACACACATGC ATAGGCTGTC GTAGGAGCGG GTTTACCCGC GAAGAGGACG GCACAGGACG AAATATATCC TACTGTTCGC GGCGAACTTT CCTACCTGAT TATCAGGTCA AGTCCTACAG CTCCACTGCC GATGGGCAGA GATGTGATGC CAGCCATGCG CCTGCATCCT TTCTCTCACT CGCTCGGAGA TTCCCCATGC TTGGCTCCCT CAACCGCAAG CTCGGCAACA TCAGTGTCGC CGCCAAGCTG GCCCTCGGCT TCGCCGTGGT CCTGCTGCTC ACCCTGGCCA CCACCATCAG CGGCTGGCGT GCCCTGGATG GTGCCATCGT GCGCTCACAG CAACTCAGCG AAATAGGCCT GATCAACGAC CTGACAAAAG ACCTGCGCGC GGAACGCATC ACCTACCGCG TGCTCAACGA CGATGCCAGC AGAGCACGCA TCAGCAATAT CCTCGACCAG CTCAACAGCA TGCTGACCAC CCTGCAACAA CGCAGCAACG TCGATGAGTC ACGGCAGTTG CTGACAGAGA AAATGGCATT GTTGCAGAGC CTGCGCGACA CCTTCAGCGA ACTGCAGCGC AGCGTCGCCA GCCGTGTAGC CCTGCGCGAA GCCCTGCAGT CACAGGAGCA TGCACTCAGC GAGGCGATTG ACCAACTGCA GACCCAGGCC TTGCTGAAAA TGCCTGACAA CAGTCAGCAA AGTGGTGTGC TGGGCCTGAT GGATACCCTC AGCCGGCATG TCGAAGGTGC CAACCAGCAA AGCCTGGTTC CAGCCTACAC CTTCGCCCCG GTCGAGGATT TTTCCAAAGT CGGTGATAAC GCCCTGGATG CCGCCGACAA TAGCCTTGCG CAACTGCTTG AAGGCCTTGC GCCGTTGGGC TTGCCACGCG CCATCACTGA GCAACCGGGT GTCGAGCTGA GCAAGTACCG CACCAGCCTG GATCAGTACC GCCGCGCCGC CGTACGTGTG GAGCAGTTGC AGAACAACAT GGAAAACATG GGCAACGAGC TGCGAACGGT GAGCCTCGAA CTGGGCAAAC GCAAGGTCGA ACAACGCGAC AGTGAGGCCG TGGCCGCCCG GTCGCTGCTG ACCAGTGTGG CGCTGCTGGC CATGGTGGTA GGGGCGCTGG CCGCCTGGCT GATCACCTTG CAGATCACCC AGCCGTTGCG CCAGACACTG GCCGTGGCTG CCCGCATCGC CAAGGGTGAC CTGAGCCAGG TCGACAGCGT GCAACGTCGC GACGAAATGG GCCAGCTGCA AACCAGCATG CGCGAGATGA CCTTGAGCCT GCGCGAGCTG ATCGGTGGCA TTGATCAGGG TGTCGGCCAG CTGTCACAGG CCGCCACACA GTTGGCGGCC AGTAGCGAAG ACACCAAGCT GCGCATCAAT CAGCAGCGCG AGGAAACTGA CCAGGTGGCG ACTGCCATGA ACCAGATGAG CGCCACCGTG CAGGAAGTGG CACAGAACGC CGAGCAAGCC TCGCTGGCCG CGACCAGCGC TGACCAGCAG GCACAGGTGG GTGACCAGGT CGTCGCCGAA GCCATCGGCC GTATCGAACA GCTGGCCGGG CAGATGGACC ATTGCCTGGC GGCCATGCAG CACCTGGCAG GCGAGAGCCA GCGGATTGGC AGCATTCTCG ATGTGATCAA GTCGGTGTCC GAACAGACCA ACCTGTTGGC GCTGAACGCA GCGATCGAAG CGGCACGGGC TGGTGAAGCC GGGCGCGGCT TTGCCGTGGT GGCCGATGAG GTGCGTGGCC TGGCACAGCG CACGTCGACG GCGACCGAAG AGATCGGCCA ACTGATCGAC AGTCTGCACA ACGGTACCGA CGAAGTGACC CGCTTGCTGG ACAGCAGCAA GAGCCTGACC GAACAGAGCG TGGAGCTGAG CCGCAGGGCC GGGCACGCAC TGAGCCAGAT CACCGACACG GTATCGAGCA TTCAGGGCAT GAACCAACAG ATCGCCACCG CCAGTGAAGA GCAGAGCGTG GTGGCCGAGC AGATCAACCG AAGTGTGATC AATGTGCGGG ATGTTTCGGA TCAGACCAGC GCGGCCAGTG AGCAGACGGC AGCCTCGAGT GGAGAACTGG AGCATCTGGG GCAGCAATTG CGGGGGATGG TGGGGCGGTT CAGCCTCTGA
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Protein sequence | MGRPCWPIST RRSPLPALPY SRVNPRLHTC IGCRRSGFTR EEDGTGRNIS YCSRRTFLPD YQVKSYSSTA DGQRCDASHA PASFLSLARR FPMLGSLNRK LGNISVAAKL ALGFAVVLLL TLATTISGWR ALDGAIVRSQ QLSEIGLIND LTKDLRAERI TYRVLNDDAS RARISNILDQ LNSMLTTLQQ RSNVDESRQL LTEKMALLQS LRDTFSELQR SVASRVALRE ALQSQEHALS EAIDQLQTQA LLKMPDNSQQ SGVLGLMDTL SRHVEGANQQ SLVPAYTFAP VEDFSKVGDN ALDAADNSLA QLLEGLAPLG LPRAITEQPG VELSKYRTSL DQYRRAAVRV EQLQNNMENM GNELRTVSLE LGKRKVEQRD SEAVAARSLL TSVALLAMVV GALAAWLITL QITQPLRQTL AVAARIAKGD LSQVDSVQRR DEMGQLQTSM REMTLSLREL IGGIDQGVGQ LSQAATQLAA SSEDTKLRIN QQREETDQVA TAMNQMSATV QEVAQNAEQA SLAATSADQQ AQVGDQVVAE AIGRIEQLAG QMDHCLAAMQ HLAGESQRIG SILDVIKSVS EQTNLLALNA AIEAARAGEA GRGFAVVADE VRGLAQRTST ATEEIGQLID SLHNGTDEVT RLLDSSKSLT EQSVELSRRA GHALSQITDT VSSIQGMNQQ IATASEEQSV VAEQINRSVI NVRDVSDQTS AASEQTAASS GELEHLGQQL RGMVGRFSL
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