Gene Pput_4876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4876 
Symbol 
ID5191027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5469626 
End bp5470081 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content61% 
IMG OID640589361 
Producthypothetical protein 
Protein accessionYP_001270180 
Protein GI148550078 
COG category[S] Function unknown 
COG ID[COG3536] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0440599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.136179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCGCGA AGAGGCCCTT GAATCCCTCC CCCATAAGCT GGAAGCTGTG CTTCATCAGC 
TCCCGAGAGA TTCTGCCCAT GGCCCGCCTG CCTACCGCCA TCAACCTGCA CAAAGCCTCC
AAAACCCTCA GCCTCACCTA CGCGCCCGGC GAGGTCTACC ACCTGCCTGC CGAATTCCTG
CGCGTGCACT CTCCCTCCGC CGAGGTCCAG GGCCACGGCA ACCCCATCCT GCAGTTCGGC
AAGATCAACG TTGGCCTCAG TGGCCTGGAA CCTGCCGGCC AATATGCACT GAAACTGACC
TTCGACGACG GCCATGACAG CGGCTTGTTC ACTTGGGAAT ACCTTGAGCA ACTGTGCCTG
CGCCAGGAAC AACTGTGGGC GGAATACCTC GACGAGTTGC ACAAGGCCGG CAAATCCCGC
GACCCAGCCG AATCTGTGGT CAAGCTCATG CTCTAG
 
Protein sequence
MPAKRPLNPS PISWKLCFIS SREILPMARL PTAINLHKAS KTLSLTYAPG EVYHLPAEFL 
RVHSPSAEVQ GHGNPILQFG KINVGLSGLE PAGQYALKLT FDDGHDSGLF TWEYLEQLCL
RQEQLWAEYL DELHKAGKSR DPAESVVKLM L