Gene Pput_4855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4855 
Symbol 
ID5195227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5445567 
End bp5446118 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content63% 
IMG OID640589340 
Productcytochrome B561 
Protein accessionYP_001270159 
Protein GI148550057 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.745808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0891705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGC GCAATTCACC TTCTCGCTAC GGCGTGGTCA GCATCATCCT GCACTGGGGC 
GTGGCGCTGG CAGTTTTCGG CCTGTTCGGC CTGGGCCTGT GGATGGTCGG CCTCGACTAC
TACAGCCCTT GGCGCAAAGC TGGCCCGGAC CTGCACAAGA GCATCGGCCT GGTGCTGCTG
GCGGTGATGC TGCTGCGGGT AGTCTGGCGT TTCATCAGCC CGCCACCACC GGCACCCACC
AACCACGGCG CAATCACACG CCTGGCGGCC AAGCTGGGCC ACCTGGCCCT GTACCTTGGG
CTGTTTGCGG TGATGGTTGC CGGTTACCTG ATTTCCACCG CCGACGGCGT CGGCATTCCG
GTGTTCGGCC TGTTCGAAGT GCCGGCACTG ATCAGCGACC TGCCTGACCA GGCAGATGTG
GCGGGTGTGG TTCATTTGTG GCTGGCTTGG GGGCTGGTGA TTTTTGCCGT GCTGCATGCC
CTTGCCGCGC TCAAGCATCA TTTCATCGAC CGTGACGCGA CCCTGACTCG CATGCTGGGC
CGCAAAGCTT GA
 
Protein sequence
MQLRNSPSRY GVVSIILHWG VALAVFGLFG LGLWMVGLDY YSPWRKAGPD LHKSIGLVLL 
AVMLLRVVWR FISPPPPAPT NHGAITRLAA KLGHLALYLG LFAVMVAGYL ISTADGVGIP
VFGLFEVPAL ISDLPDQADV AGVVHLWLAW GLVIFAVLHA LAALKHHFID RDATLTRMLG
RKA