| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4824 |
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| Symbol | |
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| ID | 5195378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5410219 |
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| End bp | 5411646 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640589309 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001270128 |
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| Protein GI | 148550026 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0486949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAC GCACCCCGCT GGACCCCGTC ACCGCCCGCT GGATCCCTTG GGTGGTGGCC
ATCGCCTTCT TCATGCAGTC CCTGGACGGC ACCATCCTCA ACACGGCGCT GCCGGCCATG
GCCCGCTCGT TGGCCGAAGA CCCCTTGCGC ATGCAAGGTG TGATCATTGC CTACATGCTC
ACCGTGGCCC TGCTGATCCC TGCCTCAGGC TGGATCGCCG ACCGTTTCGG CACCAAGCGC
ATCTTCTTCA GCGCCATCTT GCTGTTCAGC TTTGGCTCGC TGCTGTGCGC CGCAGCCAAC
AGCCTTGGCT TCCTGATCTT CGCCCGCGTA GTGCAGGGCC TGGGCGGTGC GCTGATGCTG
CCAGTCGGGC GGCTTGTGGT GCTGCGCGCC TACCCACGCA GCGAGCTGGT GCGGATCATG
AGTTTCATCA CCATCCCCGG CCTGCTCGGG CCATTGCTGG GGCCAACGGT TGGTGGCTGG
CTGGTGGAAA TCCTCAGCTG GCACTGGATC TTCCTGCTCA ACCTGCCTGT CGGCCTGCTT
GGCTGCATTG CCGTGTGGAA GTTCATCCCG GACTTGCGCG GCGCCGAGCG CACCACCTTC
GACGGCCCTG GTTTCCTGCT GTTCGGCGCA GCGATGGTAC TGATCACCAT TGCCATGGAA
GGCCTGGGCG AGCTGCACCT GCCGCACTTG CGGGTAATGT TGCTGCTGTT CGCCGGCATG
GCCTGCCTGG CCGCGTACTG GCTGCGCGCC GGGCGCGACC CGGAGCCGCT GTTCTCGCCA
AGCCTGTTCC GCGTGCGCAC CTTCGCCATC GGCATCCTCG GCAACCTGTT CGCCCGCCTG
GGCAGCGGCG CGCTGCCGTT CCTGGTGCCG TTGCTGCTGC AGGTTGCGCT GGGCTACTCA
CCCGCCCAGG CAGGCATGAG CATGATCCCG CTGGCGGCGG CGGCCATGCT GGCCAAATCC
ATTGCCCGAC CGCTGATCGA ACGGTTCGGC TATCGCATCA TCCTCACCGG CAATACCTTG
CTGCTGGGCA TCCTGCTGGC AAGCCTGGGC CTGGTGGACG AGCAGACCCC CTATTGGCTG
CTGTTGGTGC AACTTGGCCT TCTGGGCGCA GTGAACTCCA TGCAGTTCAC TGCGATGAAC
ACAGTGACGC TCATCGATCT CGACGACGCC AGCGCCAGCA GCGGTAACAG CCTGCTGTCG
GTGGTCGCGC AACTGTCGCT GAGCCTGGGT GTGGCCTGCG CCGGCGCACT GTTGGGCGGC
TTTACTGCGG CAGGCAGCGC CGAGGGCGTG GAAACCACCC TGGGCGCGTT CCAGCTGACC
TTCGTCACCA TCGGCGTAAT GGCCATGCTG GCAGCGGCGA TCTTCCTGCA GCTGGCGCCG
ACGGACGGAA GGCGTGCCCG TCGTCCGGAA CAACACATGG AGTCGTAG
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| Protein sequence | MPERTPLDPV TARWIPWVVA IAFFMQSLDG TILNTALPAM ARSLAEDPLR MQGVIIAYML
TVALLIPASG WIADRFGTKR IFFSAILLFS FGSLLCAAAN SLGFLIFARV VQGLGGALML
PVGRLVVLRA YPRSELVRIM SFITIPGLLG PLLGPTVGGW LVEILSWHWI FLLNLPVGLL
GCIAVWKFIP DLRGAERTTF DGPGFLLFGA AMVLITIAME GLGELHLPHL RVMLLLFAGM
ACLAAYWLRA GRDPEPLFSP SLFRVRTFAI GILGNLFARL GSGALPFLVP LLLQVALGYS
PAQAGMSMIP LAAAAMLAKS IARPLIERFG YRIILTGNTL LLGILLASLG LVDEQTPYWL
LLVQLGLLGA VNSMQFTAMN TVTLIDLDDA SASSGNSLLS VVAQLSLSLG VACAGALLGG
FTAAGSAEGV ETTLGAFQLT FVTIGVMAML AAAIFLQLAP TDGRRARRPE QHMES
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