Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4800 |
Symbol | |
ID | 5191936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5378055 |
End bp | 5379326 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640589285 |
Product | 3-deoxy-D-manno-octulosonic-acid transferase |
Protein accession | YP_001270104 |
Protein GI | 148550002 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0184393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGAA CTCTCTATAC CTTGCTGTTT CACCTGGGCC TGCCGCTGGT TGCGCTGCGC CTATACCTGC GCGCGCGCAA GGCGCCGGCC TATGGCCAGC GCATCGGCGA GCGCTTTGCT TTCAAGCTGC CGGCCATGCG CCAGGGTGGT ATCTGGGTAC ATGCGGTATC GGTGGGCGAG AGCATTGCTG CCGCACCCAT GGTGCGTGCC TTGCTCAAGG CTTACCCGGA GCTGCCGATC ACACTGACCT GCATGACCCC TACTGGCTCT GAACGCATTC GCGCCCTGTT CGCCAACGAG CCACGCGTGC AGCATTGCTA CCTGCCCTAC GACCTGCCTT GGGCGGCGGG GCGTTTTCTC GATCATGTGC AGCCTAAGCT GGGCATCATC ATGGAAACCG AGCTTTGGCC CAACCACATT CACCAGTGTG CCAGGCGCGG CATTCCGGTG GCGCTGGCCA ATGCGCGCTT GTCTGAGCGC TCGGCCCGTG GCTATGGGCG CTTTGCCAGG CTGACCCGGC CGATGCTGGC CGAGATGAGC CTGATTGCCG TGCAGACCGA AACCGAGGCC CAGCGCTTCC GTGACCTGGG TGCACGCCCT GAGCGTGTGC AAGTCACCGG TTCGATCAAG TTCGACCTGA CGATCGACGA ACAGCTGCTG CCGCGCGCCA GGGCATTGCG TGAACAGTGG GGGGGAGGCC AGCGCCCTGT GTGGATCGCC GCCAGCACCC ACGACGGTGA AGATGCCTTG ATCCTGCAGG CGCATCGGCA GTTGTTGCAG GTGCATGGCG ATGCCTTGCT GATCCTGGTG CCGCGCCATC CCGAGCGCTT CAATGCAGTG CATGCGTTGT GCAGCGAGCA GTTCACCACC GTGCGCCGCT CTGCCGGCAC GCTGGTCGAT GCGCAAACGC GGGTATTGCT GGGCGACACC ATGGGCGAAC TGCTGTTCCT GTATGCCCTG GCCGACATTG CCTTCGTCGG TGGCAGCCTG GTGCCGACCG GTGGGCACAA TCCGTTGGAG CCTGCGGCGC TGGCCTTGCC GGTGCTCATG GGGCCGCATG TGTTCAACTT CCTCGAAATC AGCGCGATGC TGCGCGAGGC GGGTGCGTTG CAGCAGGTGG ATGATGCTGA CGGGCTGGCC GGTGCGGTGC GCCGTCTGGT GGAACTGCCG CAGGACGCCC AGCGCATGGG CGAGGCGGGC AGGGCGGTGA TGCGGGCCAA TCAGGGGGCT TTGCAGCGAT TGCTCGAGGG GCTGGGGGCG CTTATCCGCT GA
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Protein sequence | MNRTLYTLLF HLGLPLVALR LYLRARKAPA YGQRIGERFA FKLPAMRQGG IWVHAVSVGE SIAAAPMVRA LLKAYPELPI TLTCMTPTGS ERIRALFANE PRVQHCYLPY DLPWAAGRFL DHVQPKLGII METELWPNHI HQCARRGIPV ALANARLSER SARGYGRFAR LTRPMLAEMS LIAVQTETEA QRFRDLGARP ERVQVTGSIK FDLTIDEQLL PRARALREQW GGGQRPVWIA ASTHDGEDAL ILQAHRQLLQ VHGDALLILV PRHPERFNAV HALCSEQFTT VRRSAGTLVD AQTRVLLGDT MGELLFLYAL ADIAFVGGSL VPTGGHNPLE PAALALPVLM GPHVFNFLEI SAMLREAGAL QQVDDADGLA GAVRRLVELP QDAQRMGEAG RAVMRANQGA LQRLLEGLGA LIR
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