| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4798 |
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| Symbol | |
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| ID | 5193663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5374205 |
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| End bp | 5376085 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589283 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001270102 |
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| Protein GI | 148550000 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAC AAGAAAAAGC GATCAACCTC AGCGAATCGG CACAAGTCGA TCAGCAGTCC
GTGCAACCGT TCCCGCGTTC GCGCAAGGTG TATGTCGAAG GCTCGCGCCC GGACATCCGT
GTCCCCATGC GTGAAATCAG CCTGGATGAC ACCCCGACCG ATTTCGGCGG CGAGTCCAAC
GCCCCGGTGC TGGTGTATGA CACGTCTGGC CCGTACACCG ACCCCGACGT GATCATCGAC
GTGCGCAAAG GCCTGGCCGA TGTGCGTTCG GCGTGGATCG AAGCCCGCGG TGACACCGAG
CGCCTGGAAG GCCTGAGCTC CGACTTCGGT CAGCAGCGCC TGAACGATGC GGAGCTGGCC
AAGCTGCGTT TCGCCCATGT GCGCAACCCG CGCCGGGCCA AGGCCGGCGC CAACGTCTCG
CAGATGCACT ATGCCCGTCA GGGCATCATC ACCGCCGAAA TGGAATACGT GGCCATCCGC
GAGAACATGA AGCTACAGGA GGCCCGCGCC GCCGGCCTGC TGAATGAGCA ACATGCCGGC
CACAGCTTCG GTGCCAACAT CCCGAAAGAA ATTACCCCTG AATTCGTCCG CCAGGAAATC
GCCCGTGGCC GCGCGATCAT TCCGGCCAAC ATCAACCACC CGGAAGTAGA GCCGATGATC
ATCGGCCGCA ATTTCCTGGT GAAGATCAAC GGCAACATCG GCAACAGCGC CCTGGGTTCC
TCGATCGAGG AAGAGGTGGC CAAGCTGACC TGGGGCATCC GCTGGGGCTC GGACACGGTC
ATGGACTTGT CCACCGGCAA GCACATCCAC GAAACCCGCG AGTGGATCAT TCGCAACTCG
CCGGTGCCGA TCGGTACCGT GCCGATCTAC CAGGCCCTGG AAAAGGTCAA CGGCGTGGCA
GAGGACCTGA CCTGGGAACT GTTCCGCGAC ACCCTGATCG AGCAGGCCGA ACAGGGTGTG
GACTACTTCA CCATTCACGC CGGTGTGCTG CTGCGCTATG TGCCCCTGAC CGCCAAGCGG
GTCACCGGCA TCGTCAGCCG CGGTGGCTCG ATCATGGCCA AGTGGTGCCT GGCGCACCAC
AAGGAAAACT TCCTGTACAC CCACTTCGAC GAAATCTGCG AAATCATGAA GGCCTACGAC
GTCAGCTTCT CGCTGGGCGA CGGCCTGCGC CCTGGCTCGA TTGCCGACGC CAACGACGCC
GCGCAATTCG GTGAGCTGGA AACCCTCGGC GAGCTGACCA AGATTGCCTG GAAGCACGAC
GTGCAATGCA TGATCGAAGG CCCCGGCCAC GTGCCGATGC AGTTGATCAA AGAGAACATG
GACAAGCAGC TGGAGTGCTG CGACGAGGCG CCGTTCTACA CCCTCGGCCC ACTGACCACC
GACATCGCGC CGGGTTACGA CCACATCACC TCGGGCATTG GTGCGGCGAT GATCGGCTGG
TTCGGTTGCG CCATGCTCTG CTACGTCACG CCGAAGGAGC ACTTGGGCCT GCCGAACAAG
GACGACGTCA AGACCGGCAT CATCACCTAC AAGATCGCCG CGCATGCCGC CGACCTTGCC
AAGGGCCACC CGGGTGCACA GATTCGCGAC AACGCCTTGT CCAAGGCGCG TTTCGAGTTC
CGTTGGGAAG ACCAGTTCAA CCTGGGCCTC GACCCGGACA CTGCCCGCGC TTTCCACGAC
GAGACCCTGC CGAAGGAATC GGCCAAGGTC GCGCACTTCT GCTCGATGTG CGGGCCGAAG
TTCTGCTCGA TGAAGATCAC CCAGGAAGTG CGTGAGTACG CAGCCAAGAT CGAGGCCGTG
GATGTGACGG TCGAGCAAGG CATGCGTGAG CAGGCCGAGC GGTTCCGCCA GGAAGGCAGC
CAGCTGTACC ACAAAGTCTA A
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| Protein sequence | MTKQEKAINL SESAQVDQQS VQPFPRSRKV YVEGSRPDIR VPMREISLDD TPTDFGGESN
APVLVYDTSG PYTDPDVIID VRKGLADVRS AWIEARGDTE RLEGLSSDFG QQRLNDAELA
KLRFAHVRNP RRAKAGANVS QMHYARQGII TAEMEYVAIR ENMKLQEARA AGLLNEQHAG
HSFGANIPKE ITPEFVRQEI ARGRAIIPAN INHPEVEPMI IGRNFLVKIN GNIGNSALGS
SIEEEVAKLT WGIRWGSDTV MDLSTGKHIH ETREWIIRNS PVPIGTVPIY QALEKVNGVA
EDLTWELFRD TLIEQAEQGV DYFTIHAGVL LRYVPLTAKR VTGIVSRGGS IMAKWCLAHH
KENFLYTHFD EICEIMKAYD VSFSLGDGLR PGSIADANDA AQFGELETLG ELTKIAWKHD
VQCMIEGPGH VPMQLIKENM DKQLECCDEA PFYTLGPLTT DIAPGYDHIT SGIGAAMIGW
FGCAMLCYVT PKEHLGLPNK DDVKTGIITY KIAAHAADLA KGHPGAQIRD NALSKARFEF
RWEDQFNLGL DPDTARAFHD ETLPKESAKV AHFCSMCGPK FCSMKITQEV REYAAKIEAV
DVTVEQGMRE QAERFRQEGS QLYHKV
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