| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4797 |
|---|
| Symbol | |
|---|
| ID | 5190604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 5372756 |
|---|
| End bp | 5374039 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640589282 |
|---|
| Product | putative hydroxymethylpyrimidine transporter CytX |
|---|
| Protein accession | YP_001270101 |
|---|
| Protein GI | 148549999 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1457] Purine-cytosine permease and related proteins |
|---|
| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family
[TIGR02358] probable hydroxymethylpyrimidine transporter CytX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCAC CCAGCCAGTT CTCTCCCGAC CATCCAATCC CCATCCAGCA GCGCATTTTC
GGTGCTCGCG ACCTGTTTTC ACTGTGGTTT TCCCTCGGCA TCGGCCTGAT GGTACTGCAG
GTCGGCGCCA TGCTGGCGCC AGGCCTGGGC CTTGCTGGCG CCGTGCTGGC CATCGCCCTG
GGCACCGGTG TCGGTGTGCT GTTGCTGGGT GCGGCGGGGG TTATCGGCAG CGACACCGGC
CTGTCCGCCA TGGGCACCCT GAAACTCAGC CTGGGCAGCC ATGGCGCGCG CTTGCCGGCG
CTGCTCAACT TGCTGCAACT GGTGGGTTGG GGCGCTTTCG AGATTATCGT CATGCGCGAT
GCTGCCAGCT TGCTGGGGGC GCGAGCGTTC GGTGAGGACA GTGCCTGGAA CAGCCCCATG
CTCTGGACGT TGTGCTTCGG TGCCCTGGCC ACCCTGCTGG CCGTCAGCGG GCCACTGGCC
TTCGTGCGCA AGGTGCTGCG CGCCTGGGGC ATCTGGTTGT TGCTGGGCGC TTGCCTGTGG
CTGACCTGGA ACCTGTTCGC CAAGGCTGAC CTGGCGGAGC TGTGGAACCG TGCCGGGGAT
GGTTCGATGT CGCTGGCGGT TGGCTTCGAT ATCGTCATCG CCATGCCGCT GTCCTGGCTG
CCGCTGATCG CGGACTACTC GCGCTTTGCC CGCAATGGCA AGCATGTGTT CGGCGGCACG
GTCGTTGGCT ACTTCATCGG CAACACCTGG CTGATGAGCC TGGGCGTGGC GTACACGCTG
GCGTTCGCCG CCAGTGGCGA AGTCAATGCC CTGCTGCTGG CCCTGGCAGG CGCCGGCATG
GGGATTCCGC TGCTGCTTAT TCTGCTGGAC GAGTCGGAAA AGGCTTTCGC CGACATTCAC
TCGGCGGCGG TTTCCACTGG TGTGCTGCTA CCGCTGAAGG TCGAGCACCT GGCGTTGGCC
ATCGGCGTGT TGTGCACCCT GATTGCCCTG TTGGCGCCGC TGGCACAGTA CGAAAACTTC
CTGTTGTTGA TCGGCTCGGT GTTCGCGCCG CTGTTTGGCG TGGTGCTGAT GGACCACTAC
GTGGTCCGTC GACGCCGTCT GCCAGCGCAG GTCAATGGCT TGCACTGGCA GGCGTTGGTG
GCCTGGTTTG CCGGGGCGGT GGCCTATCAC CTGATTGCCG CCAAGGCGCC GGAACTGGGC
GCTACCCTGC CCGCATTGCT GCTGGCAGGT GTGCTGCATG GGCTGCTAAG CCTCAGCCGC
GGCCGGGAAA CAGTTCAGGC TTGA
|
|---|
| Protein sequence | MTSPSQFSPD HPIPIQQRIF GARDLFSLWF SLGIGLMVLQ VGAMLAPGLG LAGAVLAIAL
GTGVGVLLLG AAGVIGSDTG LSAMGTLKLS LGSHGARLPA LLNLLQLVGW GAFEIIVMRD
AASLLGARAF GEDSAWNSPM LWTLCFGALA TLLAVSGPLA FVRKVLRAWG IWLLLGACLW
LTWNLFAKAD LAELWNRAGD GSMSLAVGFD IVIAMPLSWL PLIADYSRFA RNGKHVFGGT
VVGYFIGNTW LMSLGVAYTL AFAASGEVNA LLLALAGAGM GIPLLLILLD ESEKAFADIH
SAAVSTGVLL PLKVEHLALA IGVLCTLIAL LAPLAQYENF LLLIGSVFAP LFGVVLMDHY
VVRRRRLPAQ VNGLHWQALV AWFAGAVAYH LIAAKAPELG ATLPALLLAG VLHGLLSLSR
GRETVQA
|
|---|
| |