Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4775 |
Symbol | |
ID | 5194106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5349020 |
End bp | 5349943 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640589260 |
Product | carbohydrate kinase, YjeF related protein |
Protein accession | YP_001270079 |
Protein GI | 148549977 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.686463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAGG CAATACGGGC TCAGGTGCGT ATAATTCTGC CAGACATTGG AGCCTTTGAC CCCATGCCGC AGACCAAACA CCCCAGTAAT GCCCCACAAT TGCTCAGCAG CGTGACGGTT GCCCGCCTGC CGGCGCGGCA GGCGCATGCC CACAAAGGCG ACTTTGGCCA TGTACTGGTG GTCGGTGGCG ACCTGGGTAC CGGAGGCGCT GTGTTGCTCA GTGCCGAAGC CGCCCTGCGT TGCGGCGCCG GGCTGGTCAG CGTGGCAACC CGGCCCGAGC ACGTATCGGC CAGCCTGGCG CGCCTGCCCG AGGTCATGTG CCTGGGTGTC CGTTCGGCCA ACCAACTGAT GGGTGTGCTG GAGCGCGCCT CCGTCCTGGT GGTCGGGCCC GGCCTGGGGC AGGCGGCGTG GGGCTGTAGC CTGTTGTCGG CGGTGGCCAA CGCCGAGCGG CCGCAAGTGT GGGATGCCGA TGCCTTGAAT TTGCTGGCGC GAACCCCGCT GGCCCTGCCC AGTGGCAGCA TCCTTACTCC GCACCCGGGG GAGGCGGCGC GGCTGCTGGG CATTGCCACT GAGGCCGTGC AGGCCGACCG CCCTGGTGCT GCGCGCAAGC TGGCGCGCCG TTATAACAGC GTCTGTGTAC TCAAAGGTGC CGGCACCCTG GTGGCAGCCC CGAGCGGGCA GCTGGCGTTG TGCGAGCGCG GGCACCCGGC GATGGCCGGC GCCGGCCTGG GCGATGTGCT GACTGGCGTG CTGGCAGCCC TGTTGGCCCA AGGCCTGGAT GCCTGGGGCG CAGCCTGTCT GGGGGTGTGG CTGCACGCCT GTGCCGGCGA GCGCCTTGGG AAAAAAGGTA GAGGCCTGGC GGCCAGTGAT CTGGCGCCGG TCATTCGTGA GTTGTTGGAG GAGCATTCTG CGTGTCTGGC TTAA
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Protein sequence | MGKAIRAQVR IILPDIGAFD PMPQTKHPSN APQLLSSVTV ARLPARQAHA HKGDFGHVLV VGGDLGTGGA VLLSAEAALR CGAGLVSVAT RPEHVSASLA RLPEVMCLGV RSANQLMGVL ERASVLVVGP GLGQAAWGCS LLSAVANAER PQVWDADALN LLARTPLALP SGSILTPHPG EAARLLGIAT EAVQADRPGA ARKLARRYNS VCVLKGAGTL VAAPSGQLAL CERGHPAMAG AGLGDVLTGV LAALLAQGLD AWGAACLGVW LHACAGERLG KKGRGLAASD LAPVIRELLE EHSACLA
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