| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4710 |
|---|
| Symbol | |
|---|
| ID | 5192897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 5277745 |
|---|
| End bp | 5278464 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640589193 |
|---|
| Product | cobalt-precorrin-6x reductase |
|---|
| Protein accession | YP_001270014 |
|---|
| Protein GI | 148549912 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2099] Precorrin-6x reductase |
|---|
| TIGRFAM ID | [TIGR00715] precorrin-6x reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.54445 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCGC GCATCCTGTT GCTGGGGGGG GTCACTGAAG CCCTGGCGAT GGCCCGCCAA
CTCGGGCCTC GACATGTCTA CAGCCTGGCC GGTATCGGCC GCGTGCCGCA GGGCTTGGAA
TGCCAGGTGC GGGTCGGGGG CTATGGCGGT GTCGAGGGCC TGACCCGCTA CCTGCGCGAG
GCGGGCATCA CCCTGCTGAT CGACGCCACC CATCCCTATG CCGCGCAAAT CAGCCGCAAT
GCCGCCAGCG CCGCACGCAA CGTCGGCATC CCGTGCTGGG CCTTGCGTCG TCCCGCCTGG
CAGGCGCAAG CAGGGGACGA CTGGCGAGAA GTCGAGGATT GGGCAGGGTT GATCGAAGCA
CTGAAGCCGT TCCGCAGGCC ACTGTTCACG CTAGGACGCG AGCCGCTGCA GCACCTGGAC
GAGATTCCGC CAGAGCAGTT CTGGACCTTG CGTGCGCTGG AGGCGTGCCC TGGCAACGAG
CGCTGTGAAG TGATTGGCGC ACGTGGGCCG TTCCATATCG AAGATGAGCG GGCGTTGTTC
CAGCGCCGCC ACATCGATGT GCTGATCAGC AAGAACAGCG GCAGTGTGGC GACCGAGCCG
AAGCTGGAGG TAGCGCGGGA GCTTGGCGTG CCGGTGCTTG TCCTGAAACG TCCGGCACTG
CCGGAGGTGG ACCGGACATT CGACTCACTG GCGGACCTGG CAACAGCACT CGCCCTCTAG
|
|---|
| Protein sequence | MTARILLLGG VTEALAMARQ LGPRHVYSLA GIGRVPQGLE CQVRVGGYGG VEGLTRYLRE
AGITLLIDAT HPYAAQISRN AASAARNVGI PCWALRRPAW QAQAGDDWRE VEDWAGLIEA
LKPFRRPLFT LGREPLQHLD EIPPEQFWTL RALEACPGNE RCEVIGARGP FHIEDERALF
QRRHIDVLIS KNSGSVATEP KLEVARELGV PVLVLKRPAL PEVDRTFDSL ADLATALAL
|
|---|
| |