Gene Pput_4685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4685 
SymbolnadD 
ID5192328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5251424 
End bp5252116 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content64% 
IMG OID640589168 
Productnicotinic acid mononucleotide adenylyltransferase 
Protein accessionYP_001269989 
Protein GI148549887 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1057] Nicotinic acid mononucleotide adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGTT GCGCGGCCAG GGGTCCTGCT GAGTTGAGCA AGGCCCAGGC AGTCCGGCGT 
ATCGGCATTC TAGGTGGTAC CTTCGACCCC GTGCATATCG GCCACTTGCG CAGCGCGCTG
GAAGTGGCCG AGTTCATGGG GCTGGATGAG CTACGCCTGT TGCCCAATGC CCGGCCGCCG
CACCGCGACA CGCCACAGGT GGCCGCGCAG GATCGCCTGG CCATGGTCCG TGAAGCGGTG
CAGGGCGTCG CTTGCCTGAG CGTCGATGCC CGCGAGCTGG AACGTGACAA GCCGTCGTAC
ACCATCGATA CGCTGGAATC GATCCGCGCC GAGCTGTCCG GCCACGACCA GCTGTTCCTG
GTGCTGGGTT GGGATGCCTT CTGTGGTCTG CCCGCCTGGC ATCGCTGGGA AGAATTGCTG
CAACACTGTC ACATCCTGGT ACTGCAACGT CCGGATGCCG ACGTAGAACC CCCTGACGAG
TTGCGCAACC TGTTGGCTGC GCGCTCGGAG AGCGATCCCA CCGCCATGTC CGGCCCGGCG
GGAAATATTT CGTTCGTCTG GCAGACGCCG CTTGCGGTGT CGGCTACACA GATCCGACAG
CTGCTGGCCA GCGGCAAATC GGTGAGGTTC CTGGTGCCGG ACGCCGTACT GGCCTATATC
GAGGCGCACG AACTGTATCG TGCGCCCAAC TGA
 
Protein sequence
MASCAARGPA ELSKAQAVRR IGILGGTFDP VHIGHLRSAL EVAEFMGLDE LRLLPNARPP 
HRDTPQVAAQ DRLAMVREAV QGVACLSVDA RELERDKPSY TIDTLESIRA ELSGHDQLFL
VLGWDAFCGL PAWHRWEELL QHCHILVLQR PDADVEPPDE LRNLLAARSE SDPTAMSGPA
GNISFVWQTP LAVSATQIRQ LLASGKSVRF LVPDAVLAYI EAHELYRAPN