| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4679 |
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| Symbol | |
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| ID | 5195564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5245406 |
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| End bp | 5246407 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589162 |
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| Product | rare lipoprotein A |
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| Protein accession | YP_001269983 |
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| Protein GI | 148549881 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0797] Lipoproteins |
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| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.362563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCAA TCATCTCTGG CAACGCTTTC AAGCTGCTCA CCTGCCTCGC CGTCGGTGTG
GCGCTGGCCA GCTGCTCTTC CAACCGCCCG GCCCCGAAAA GCAGTGGTAA CGTCGTGCGC
AGCCAGCCGG GCCTGGACAT CAACCGGGCG CACAAGGACG GCGCACCGTG GTGGGACGTG
GATGTGAACA AGATCCCCGA TGCCACCCCG ACCGTGCACA CCGGTAACTA CAAAGCCAAC
CCGTACACGG TGCTTGGCAA GACCTACTAC CCGATGCAGG ACTCGCGCAA CTACCGCGCC
GAGGGTACGG CGTCGTGGTA CGGCACCAAG TTCCATGGGC AGAACACCGC CAATGGCGAA
CTGTACGACC TGTATGGCAT GAGCGCGGCT CACAAGACCC TGCCTCTGCC GGCCTACGTC
AAGGTGACCA ACCTCGCCAA TAACCGCAGC GTGATCCTGC GGGTCAACGA CCGTGGCCCG
TTCTATTCTG ACCGCATCAT TGATTTGTCC TATGCTGCGG CAAAAAAGCT CGGTTATGCC
GAGATCGGTA CCGCGCACGT GCGCGTCGAG GGCATCGACC CGCAGCAGTG GTGGGCCCAG
CGTGGCCAGA CCCCACCTAT GGTGCTGAAA GAGCCGCAAG TGGCCCAGAC CCAGGCAATA
CCGGCCAGTA CCGGGCGTGT CGAGCAATGG ACCCCGCCGC CACAGCAGCA CGCCGCGCCC
GTGGTACCGG TGCAGGTGGG TGGCAATAAC GTGCCTGGCG GTAGCGGTGG CAGTTTCTTG
CAGGTAGGCG CGTTCGCCAA CCCGGACGCT GCCGAGTTGC TGCGCGCCAA GCTCAGCACC
ATGGTCAATG CACCCGTGTT CATCAGCTCG ATCGTGCGTA ACCAGCAGAC CCTGCACCGC
GTGCGCCTGG GGCCGATCGG CAGCCAGGGC GAGATCCAGC AAGCACAGGA CAGCATTCGC
CTGGCGAACT TGGGGCAGGC AAAGCTGGTC ACAGCAGACT GA
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| Protein sequence | MRAIISGNAF KLLTCLAVGV ALASCSSNRP APKSSGNVVR SQPGLDINRA HKDGAPWWDV
DVNKIPDATP TVHTGNYKAN PYTVLGKTYY PMQDSRNYRA EGTASWYGTK FHGQNTANGE
LYDLYGMSAA HKTLPLPAYV KVTNLANNRS VILRVNDRGP FYSDRIIDLS YAAAKKLGYA
EIGTAHVRVE GIDPQQWWAQ RGQTPPMVLK EPQVAQTQAI PASTGRVEQW TPPPQQHAAP
VVPVQVGGNN VPGGSGGSFL QVGAFANPDA AELLRAKLST MVNAPVFISS IVRNQQTLHR
VRLGPIGSQG EIQQAQDSIR LANLGQAKLV TAD
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