Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4666 |
Symbol | lnt |
ID | 5192235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5231728 |
End bp | 5233245 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640589149 |
Product | apolipoprotein N-acyltransferase |
Protein accession | YP_001269970 |
Protein GI | 148549868 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0815] Apolipoprotein N-acyltransferase |
TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.372109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.737188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTTGGA TCACCCGCCC CGGCTGGCCC GGTAACCTGC TGGCCCTGGC GGCCGGTGCT TCCACCCTCC TGGCCCTGGC GCCGTTCGAC ATCTGGCCGT TGGCGGTGCT GTCCATCGCG GTGCTCTACC TTGGCCTGCG CGAGCTCAGC CCGCGCCAGG CCATGTGGCG TGGCTGGTGG TTTGGGTTCG GCCTGTATGG CGCCGGCACC TGGTGGATCT ACGTCAGCAT GAACACCTAC GGCGGCGCCT CGCCGCTGCT GGCAATCGTG TTGTTGCTGG CGTTCTTCGC CGCACTGGCC TGGTTCTTCG CCCTGCCCAC CTGGCTGTGG GCGCGCTGGC TACGGCGCAA CGAAGCACCA CTGGCCGACG CCCTGTGCTT CGCCGCCCTC TGGTTACTGC AAGAGGCCTT CCGCGGCTGG TTCCTGACCG GCTTCCCCTG GCTCTACGCC GGCTATAGCC AACTGGACGG CCCGTTGGCC GGTCTTGCGC CGCTGGGCGG CGTCTGGCTG ATTTCCTTCA CCCTCGCCCT CACCGCCGCC CTGCTGTGCA ACCTTCACCG CCTGCGCACC CGCCCCTCGT TCCTGGCCGT GGCCAGCGTG CTGTTGCTGG CCCCCTGGGG GCTGGGCCTG GCGCTCAAGG GCCATGCCTG GACCATTCCG GCAGGCGAGC CGCTGAAAGT GGCAGCGATC CAGGGCAACG TCGAGCAGGA CCTGAAATGG GACCCCGCGC ACATCGACGC GCAACTGGCG CTATACCGCG ACCTGAGCTT CAGTTCCAGG CCGGTGGACC TGCTGGTGTG GCCGGAAACC GCCGTTCCGG TGCTCAAGGA CCAGGCCCAG GGCTACATCG ACGTGATGGG CCGCTTCGCT GCCGAGCGCC ATTCGGCGCT GATCACGGGC GTACCAGTGC GTGAAGTAGT GCACCACCAG CGCCGCTACT ACAACGGCAT CACCGTCACT GGCGAAGGCG ATGGCACCTA CCTCAAGCAG AAGCTGGTGC CATTTGGCGA GTATGTGCCG CTGCAAGACG TGCTGCGTGG GGCCATCGAG TTCTTCAACC TGCCCATGTC CGACTTCGCC CGCGGCCCGG AAGACCAGCC GCTGCTGCAG GCCAAGGGCT ACCAGATTGC CCCTTACATC TGCTACGAGG TGGTCTACCC TGAGTTCGCC GCCGGCCTGG CTGCGCGTAG CGACCTGCTG CTGACCATCA GCAACGACAC CTGGTTCGGC AAATCGATCG GCCCTTTGCA GCACCTGCAG ATGGCGCAGA TGCGCGCGCT GGAAGCCGGC CGCTGGATGA TCCGCGCCAC CAACAACGGC GTGACCGCGC TGATCGACCC GTTTGGCCGC ATTACCACGC AGATTCCGCA GTTCCAGCAG GCCGTGCTGT ATGGCGAGGT GGTGCCGATG CAGCAGCTGA CGCCTTACCT GCAATGGCGC TCATGGCCGC TGGCAATTGT CTGTGCATTG CTGCTGGGGT GGGCGTTGCT GGCAGGGCGT ATTGCAAAAA CCGTCTGA
|
Protein sequence | MRWITRPGWP GNLLALAAGA STLLALAPFD IWPLAVLSIA VLYLGLRELS PRQAMWRGWW FGFGLYGAGT WWIYVSMNTY GGASPLLAIV LLLAFFAALA WFFALPTWLW ARWLRRNEAP LADALCFAAL WLLQEAFRGW FLTGFPWLYA GYSQLDGPLA GLAPLGGVWL ISFTLALTAA LLCNLHRLRT RPSFLAVASV LLLAPWGLGL ALKGHAWTIP AGEPLKVAAI QGNVEQDLKW DPAHIDAQLA LYRDLSFSSR PVDLLVWPET AVPVLKDQAQ GYIDVMGRFA AERHSALITG VPVREVVHHQ RRYYNGITVT GEGDGTYLKQ KLVPFGEYVP LQDVLRGAIE FFNLPMSDFA RGPEDQPLLQ AKGYQIAPYI CYEVVYPEFA AGLAARSDLL LTISNDTWFG KSIGPLQHLQ MAQMRALEAG RWMIRATNNG VTALIDPFGR ITTQIPQFQQ AVLYGEVVPM QQLTPYLQWR SWPLAIVCAL LLGWALLAGR IAKTV
|
| |