Gene Pput_4666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4666 
Symbollnt 
ID5192235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5231728 
End bp5233245 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content66% 
IMG OID640589149 
Productapolipoprotein N-acyltransferase 
Protein accessionYP_001269970 
Protein GI148549868 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0815] Apolipoprotein N-acyltransferase 
TIGRFAM ID[TIGR00546] apolipoprotein N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.372109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.737188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTGGA TCACCCGCCC CGGCTGGCCC GGTAACCTGC TGGCCCTGGC GGCCGGTGCT 
TCCACCCTCC TGGCCCTGGC GCCGTTCGAC ATCTGGCCGT TGGCGGTGCT GTCCATCGCG
GTGCTCTACC TTGGCCTGCG CGAGCTCAGC CCGCGCCAGG CCATGTGGCG TGGCTGGTGG
TTTGGGTTCG GCCTGTATGG CGCCGGCACC TGGTGGATCT ACGTCAGCAT GAACACCTAC
GGCGGCGCCT CGCCGCTGCT GGCAATCGTG TTGTTGCTGG CGTTCTTCGC CGCACTGGCC
TGGTTCTTCG CCCTGCCCAC CTGGCTGTGG GCGCGCTGGC TACGGCGCAA CGAAGCACCA
CTGGCCGACG CCCTGTGCTT CGCCGCCCTC TGGTTACTGC AAGAGGCCTT CCGCGGCTGG
TTCCTGACCG GCTTCCCCTG GCTCTACGCC GGCTATAGCC AACTGGACGG CCCGTTGGCC
GGTCTTGCGC CGCTGGGCGG CGTCTGGCTG ATTTCCTTCA CCCTCGCCCT CACCGCCGCC
CTGCTGTGCA ACCTTCACCG CCTGCGCACC CGCCCCTCGT TCCTGGCCGT GGCCAGCGTG
CTGTTGCTGG CCCCCTGGGG GCTGGGCCTG GCGCTCAAGG GCCATGCCTG GACCATTCCG
GCAGGCGAGC CGCTGAAAGT GGCAGCGATC CAGGGCAACG TCGAGCAGGA CCTGAAATGG
GACCCCGCGC ACATCGACGC GCAACTGGCG CTATACCGCG ACCTGAGCTT CAGTTCCAGG
CCGGTGGACC TGCTGGTGTG GCCGGAAACC GCCGTTCCGG TGCTCAAGGA CCAGGCCCAG
GGCTACATCG ACGTGATGGG CCGCTTCGCT GCCGAGCGCC ATTCGGCGCT GATCACGGGC
GTACCAGTGC GTGAAGTAGT GCACCACCAG CGCCGCTACT ACAACGGCAT CACCGTCACT
GGCGAAGGCG ATGGCACCTA CCTCAAGCAG AAGCTGGTGC CATTTGGCGA GTATGTGCCG
CTGCAAGACG TGCTGCGTGG GGCCATCGAG TTCTTCAACC TGCCCATGTC CGACTTCGCC
CGCGGCCCGG AAGACCAGCC GCTGCTGCAG GCCAAGGGCT ACCAGATTGC CCCTTACATC
TGCTACGAGG TGGTCTACCC TGAGTTCGCC GCCGGCCTGG CTGCGCGTAG CGACCTGCTG
CTGACCATCA GCAACGACAC CTGGTTCGGC AAATCGATCG GCCCTTTGCA GCACCTGCAG
ATGGCGCAGA TGCGCGCGCT GGAAGCCGGC CGCTGGATGA TCCGCGCCAC CAACAACGGC
GTGACCGCGC TGATCGACCC GTTTGGCCGC ATTACCACGC AGATTCCGCA GTTCCAGCAG
GCCGTGCTGT ATGGCGAGGT GGTGCCGATG CAGCAGCTGA CGCCTTACCT GCAATGGCGC
TCATGGCCGC TGGCAATTGT CTGTGCATTG CTGCTGGGGT GGGCGTTGCT GGCAGGGCGT
ATTGCAAAAA CCGTCTGA
 
Protein sequence
MRWITRPGWP GNLLALAAGA STLLALAPFD IWPLAVLSIA VLYLGLRELS PRQAMWRGWW 
FGFGLYGAGT WWIYVSMNTY GGASPLLAIV LLLAFFAALA WFFALPTWLW ARWLRRNEAP
LADALCFAAL WLLQEAFRGW FLTGFPWLYA GYSQLDGPLA GLAPLGGVWL ISFTLALTAA
LLCNLHRLRT RPSFLAVASV LLLAPWGLGL ALKGHAWTIP AGEPLKVAAI QGNVEQDLKW
DPAHIDAQLA LYRDLSFSSR PVDLLVWPET AVPVLKDQAQ GYIDVMGRFA AERHSALITG
VPVREVVHHQ RRYYNGITVT GEGDGTYLKQ KLVPFGEYVP LQDVLRGAIE FFNLPMSDFA
RGPEDQPLLQ AKGYQIAPYI CYEVVYPEFA AGLAARSDLL LTISNDTWFG KSIGPLQHLQ
MAQMRALEAG RWMIRATNNG VTALIDPFGR ITTQIPQFQQ AVLYGEVVPM QQLTPYLQWR
SWPLAIVCAL LLGWALLAGR IAKTV