| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4648 |
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| Symbol | |
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| ID | 5194860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5212661 |
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| End bp | 5215189 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640589131 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_001269952 |
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| Protein GI | 148549850 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.052727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.20008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCAT TACCCATTGA TGCTGCCTTG CCCGCCCTGC GCCAGGCTCT GGAAAACCGT
GACGAAGTGG TGCTTGAAGC GCCGCCTGGC GCTGGCAAGA CCACCCGCGT GCCACTGGCG
CTGCTGCACG AACCGTGGCT GGCCGGGCAG AGCATCCTCA TGCTCGAGCC ACGGCGCCTG
GCTGCGCGGG CAGCGGCCGA ACGGCTGGCC AGTGAGCTGG GCGAGCAGGT TGGGGAAACG
GTGGGTTACC GCATCCGTCT GGACAGCAAG GTCGGCCCGA AAACCCGTAT TGAAGTGGTG
ACCGAAGGCA TCCTCACACG CCGCCTGCAA GCCGACCCGG CGCTGGAAGG GGTGGGCCTG
CTGATTTTCG ACGAATATCA CGAACGCAGC CTGGATGCCG ATCTCGCACT TGCGCTGAGC
CTTAACGGCC GCGAGTTGCT GCGTGACGAC CCGCCACTGA AGATTCTGCT GATGTCCGCG
ACCCTGGAAG GCGAGCGCCT GTCGCGGTTG CTGGACGATG CCCCGGTGGT CAGCAGCGAA
GGCCGCATGC ATCCGGTGGA TATCCGCTGG GGGCGGCCGT TCCAGCCAGG CGAGTTCATC
GAGCCACGGG TGGTGGACAG CGTGCTGCAT GCGCTGGCTG ACCAGGCCGG CAGCGTGCTG
GTGTTCCTGC CTGGGCAAGC CGAGATCCGC CGGGTTCACC AAAGCCTTCA GGAGGTACTG
GGCGCGCGCC CCGAGATTCT GCTGTGCCCG CTGCATGGCG AACTCGACCT CAATGCCCAG
CGTGCCGCTA TCGATCCGCC GCCCAAGGGA TCGCGCAAGG TGGTGCTGGC CACCAACATC
GCTGAGACCA GCCTGACCAT CGATGGCGTG CGCGTGGTGA TCGACGCAGG CCTGGCCCGG
GTGCCGCGCT TCGACCCCGG CAGCGGCATG ACCCGCCTGG ACACCCAGCG CATTTCCCGC
GCCAGTGCCA CCCAGCGCGC TGGGCGTGCC GGCCGCCTGG AACCCGGCGT GTGCTACCGC
CTTTGGTCCG AGGCCCAGCA TGACCAGCTG GCCGCCCATG GCAGTGCCGA GATTCTCCAG
GCCGACCTGG CCGGGCTGGC CCTGCAGTTG GCGCGCTGGG GTGTAACCCC CGAGCAGTTG
CGCTGGCTCG ACCAGCCGCC AGCTGCAGCG TACGCCCAGG CACAGGACCT GTTGGCGCGA
CTCAGCGCCT TCCGGCCGGG CAGCCGCGAC ACCCTCAGCG AACATGGCCA GGCCATGGCC
GAACTGCCGG CTCACCCACG CATCGCGCAC TTGTTGCTGC GCGGCCAGGA CCTGGGCCTG
GCACAGATGG CATGCGATGT GGCTGCACTG CTGGGGGAGC GGGACATCCA GCGTGGCGGT
GGTGCCGACT TGCACAGCCG GCTTGCGCTG GTCAGCGGTG AGAGCAAGGC TGCGCGTGGC
GGCCAGGGTG GTGTGCAGCG TGCTCGTCAG CTGGCCCGGC AATACCGTGG CCTGTTGCGT
GGCAAGGTCG GTGCACCGGT TGCCGACCCG GACCACCCAC GCTGGCTGGG CGCCCTGTTG
GCGCTGGCCT ACCCTGACCG GGTCGCCCAG CAGCGCCGGG CGGGCGGGGC GGAGTATCGG
CTCGCCAACG GCCGTGCGGC CCTGTTTGGC GAAGTCGATG CATTGATGAA GTGCCCATGG
CTGGTGATCG CCGACCTGGG TAGCCGCCAG GGGCAGCGTG AGGAGCGGAT CTATCTGGCC
GCCGAATTCG ATCCGGCGTT GCTCGAGGGT GTGCTGGCCG AACAGGTCGA GCGGGTCGAT
ATCCTTGATT GGGACGAGCG CGAGCAGGTG TTGCGCGCCG AGCGCCAGGT GAAGGTTGGC
GAACTGGTCC TCAGCCGTGA GCCGCTGCCC GGGCTGGATG ATGAAGCCAG GGCCCGAGCG
CTGCTTAGCC TGGTCCGGCG CAAAGGTTTG AACCTGCTGA CCTGGACGCC GGAACTGCGG
CAATGGCAGG CACGTGTGGC GCTGCTGCGT CAGCTCGACC TGCAGAAGGA TGGCCACAGC
GAATGGCCTG ACCTGGGAGA CGAGGCCCTG CTGGCCAGCC TGGAAGACTG GTTGCAGCCT
TACCTGAGCA AAGTATCGCG CCTCAGCCAC TTTGCCGCGC TGGACTTGCC GTCGATGCTG
CGCAACCTGC TGCCCTGGCC GCTGCCGCAA CGCCTGGAAG AACAGGCCCC GGCGCATCTG
GCCGTACCGT CCGGCTCGAA CATCCGCCTG GATTACAGCG AAACTCCGCC GATTCTCGCC
GTGCGTCTGC AAGAACTGTT CGGCCTTGCC GATACCCCGC GCATCGCCAA CGGCCGGCAG
CAGGTCAAGC TGCACCTGCT GTCACCGGCA CGTCGGCCGG TGCAGGTGAC CCAGGACCTG
GCCAGCTTCT GGCGCACGAC CTATGCCGAG GTGAAGAAAG ACCTGAAAGG GCGCTATCCG
AAGCATTACT GGCCGGACGA CCCTCTGGTG GCCGAGGCTA CGGCGCGGGC CAAGCCGAGA
GGGAGCTGA
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| Protein sequence | MISLPIDAAL PALRQALENR DEVVLEAPPG AGKTTRVPLA LLHEPWLAGQ SILMLEPRRL
AARAAAERLA SELGEQVGET VGYRIRLDSK VGPKTRIEVV TEGILTRRLQ ADPALEGVGL
LIFDEYHERS LDADLALALS LNGRELLRDD PPLKILLMSA TLEGERLSRL LDDAPVVSSE
GRMHPVDIRW GRPFQPGEFI EPRVVDSVLH ALADQAGSVL VFLPGQAEIR RVHQSLQEVL
GARPEILLCP LHGELDLNAQ RAAIDPPPKG SRKVVLATNI AETSLTIDGV RVVIDAGLAR
VPRFDPGSGM TRLDTQRISR ASATQRAGRA GRLEPGVCYR LWSEAQHDQL AAHGSAEILQ
ADLAGLALQL ARWGVTPEQL RWLDQPPAAA YAQAQDLLAR LSAFRPGSRD TLSEHGQAMA
ELPAHPRIAH LLLRGQDLGL AQMACDVAAL LGERDIQRGG GADLHSRLAL VSGESKAARG
GQGGVQRARQ LARQYRGLLR GKVGAPVADP DHPRWLGALL ALAYPDRVAQ QRRAGGAEYR
LANGRAALFG EVDALMKCPW LVIADLGSRQ GQREERIYLA AEFDPALLEG VLAEQVERVD
ILDWDEREQV LRAERQVKVG ELVLSREPLP GLDDEARARA LLSLVRRKGL NLLTWTPELR
QWQARVALLR QLDLQKDGHS EWPDLGDEAL LASLEDWLQP YLSKVSRLSH FAALDLPSML
RNLLPWPLPQ RLEEQAPAHL AVPSGSNIRL DYSETPPILA VRLQELFGLA DTPRIANGRQ
QVKLHLLSPA RRPVQVTQDL ASFWRTTYAE VKKDLKGRYP KHYWPDDPLV AEATARAKPR
GS
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