| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4642 |
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| Symbol | |
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| ID | 5193039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5208079 |
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| End bp | 5208999 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640589125 |
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| Product | hypothetical protein |
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| Protein accession | YP_001269946 |
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| Protein GI | 148549844 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | [TIGR00950] Carboxylate/Amino Acid/Amine Transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0734055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0123004 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCCT CCCGTCGTTT CCCGCTGCTG CTGATTGGCG CCTTCCTGGC CCTGTATCTG
GTCTGGGGTT CCACTTACCT GTTCATTCGC ATCGGCGTCG AGAGCTGGCC TCCGATGCTC
ATGGCCGGTG TGCGCTTCCT GATCGCCGGT GGCCTGCTGT ACGGCTTCCT GCGTTGGCGC
GGCGTGCCGG CACCTACCTG GCCACAATGG CGGGCGGCAG GGGCGATCGG TTTCTTGTTG
CTCAGCTGTG GCAACGGCGG GGTCACCGTG GCTGAGCATG CCGGCGTGGC TTCGGGCGTG
GCGGCTTTGG CGGTGGCGAC GGTGCCGCTG TTCACCTTGC TGTTCGGCCT GTTGTTCGGG
CACCGCAATT CGAAGCTGGA GTGGGCGGGG ATAGCCCTTG GGCTGGTGGG CATCGGCCTG
CTGAACCTGG GCTCCAACCT GCAGGCAAGC CCGATAGGTG CAGCGCTGAT CATCTTCGCG
GCGGCGTCCT GGGCGTTTGG CTCGGTGTGG AGCAAGACCT TGCCGCTGCC CCAGGGGCCG
ATGGCCAGCG CAGCGGAAAT GCTGGCCGGG GGTGCGGTGC TGTTGCTGGG CAGTGTGCTA
TCGGGCGAAC GCATGACACA GCTGCCGACC GCCGCTGGCT GGGGGGCGCT GGCCTATCTG
GTGTTCTTCG GTTCGATCCT GGCGTTCAGT GCCTACATGT ACCTGCTCAA GCACGTGCGC
CCGGCAGCGG CCACCAGCTA CGCCTACGTC AACCCGGCGG TGGCGGTGCT GCTGGGGATC
GTCTTTGCCG GTGAGCAGAT TGGCGCTGAA GAGTGTGTGG CGATGGCAGT GATCATCGGT
GCGGTGGTGC TGATCGGCCT GCCGCAGTGG CGCAAGGCGC CTGACCCTGT GCAACCGTTG
AAAGGTGAAA TCTGCAAGTA G
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| Protein sequence | MPASRRFPLL LIGAFLALYL VWGSTYLFIR IGVESWPPML MAGVRFLIAG GLLYGFLRWR
GVPAPTWPQW RAAGAIGFLL LSCGNGGVTV AEHAGVASGV AALAVATVPL FTLLFGLLFG
HRNSKLEWAG IALGLVGIGL LNLGSNLQAS PIGAALIIFA AASWAFGSVW SKTLPLPQGP
MASAAEMLAG GAVLLLGSVL SGERMTQLPT AAGWGALAYL VFFGSILAFS AYMYLLKHVR
PAAATSYAYV NPAVAVLLGI VFAGEQIGAE ECVAMAVIIG AVVLIGLPQW RKAPDPVQPL
KGEICK
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