Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4636 |
Symbol | |
ID | 5193750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5201246 |
End bp | 5202115 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640589119 |
Product | acyl-CoA thioesterase II |
Protein accession | YP_001269940 |
Protein GI | 148549838 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1946] Acyl-CoA thioesterase |
TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0147271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00276811 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGTCATG TGTTGGACGA CCTGGTCGAC CTGTTGAGCC TCGAATCCAT CGAGGAGAAC CTGTTCCGTG GACGTAGCCA GGACCTGGGC TTCCGCCAGC TTTACGGTGG CCAAGTGCTG GGCCAGTCGT TGTCGGCTGC CAGCCAGACA GTCGAGGACG CGCGCCATGT GCATTCGTTG CACGGCTACT TCCTGCGCCC GGGCGATGCC AGCCTTCCAG TGGTGTACTC GGTAGACCGC GTACGCGATG GCGGCAGCTT CAGTACACGG CGGGTGACGG CGATCCAGAA GGGCCAGACC ATCTTCACCT GCAGCGCGTC GTTCCAGTAC GACGAGGAAG GCTTCGAGCA CCAGGCGCAG ATGCCTGACG TGGTCGGCCC GGAAAACCTG CCTACCGAAG TCGAACTGGC CCGTGCCATG GCCGACCAGT TGCCCGAGCG CATTCGCGAC AAGGTGCTGT GTGCCAAGCC GATCGAGATC CGCCCGGTCA CCGAGCGCGA CCCGTTCAAC CCCAAGCCGG GCGACCCGGT GAAATACGCC TGGTTCCGCG CCGACGGCAA CCTGCCGGAC GTGCCTGCCC TGCACAAGTA CATGCTGGCC TACGCCTCGG ACTTCGGCCT GCTGACCACG GCGTTGCTGC CCCATGGCAA ATCGGTGTGG CAGCGCGACA TGCAGATCGC CAGCCTCGAC CATTCGCTGT GGTTTCACGG CAACCTGCGC GCCGACGAGT GGCTCCTGTA CGCCACCGAT AGCCCCTGGG CCGGTAACTC CCGTGGCTTC TGCCGCGGCA GCATTTTCAA CCAGGCCGGG CAACTGGTGG CATCGTCGAG CCAGGAAGGC CTGATTCGCC ATCGCAAGGA CTGGGCATGA
|
Protein sequence | MSHVLDDLVD LLSLESIEEN LFRGRSQDLG FRQLYGGQVL GQSLSAASQT VEDARHVHSL HGYFLRPGDA SLPVVYSVDR VRDGGSFSTR RVTAIQKGQT IFTCSASFQY DEEGFEHQAQ MPDVVGPENL PTEVELARAM ADQLPERIRD KVLCAKPIEI RPVTERDPFN PKPGDPVKYA WFRADGNLPD VPALHKYMLA YASDFGLLTT ALLPHGKSVW QRDMQIASLD HSLWFHGNLR ADEWLLYATD SPWAGNSRGF CRGSIFNQAG QLVASSSQEG LIRHRKDWA
|
| |