| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4611 |
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| Symbol | |
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| ID | 5192272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5162468 |
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| End bp | 5164153 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640589094 |
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| Product | restriction modification system DNA specificity subunit |
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| Protein accession | YP_001269915 |
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| Protein GI | 148549813 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.483614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000795371 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGTCGC TGCTCACCGA TAACCTGCCA CTGCTGGCGG GCGCGCCCAA TGGCATCAAA
AAGCTGCGTG AATTGATTCT GGAACTGGCG GTGCGCGGCA AGTTGGTGCC GCAAGATCCC
GAGGATTTAT CAGCCAGAAC GGGCTTGGAT GCTTCTCGAA CCGAGCGTGC TAAGGCAATG
CTCGAAGGTA AGATCAAGAA AGAAAAGCCT GCAATGGAAG TGGCAGATAG TGAGCAGCCA
TTTGAATTGC CAGACGGTTG GGCCTGGTGT CGTATTGTTG ACACGGGAAA CTACATCAAT
GGACTGGCAT TCAAACCTAG TGATTGGTCT AGCACGGGTA GACCAATAAT CCGGATTCAG
AACCTTTCTG GTCGGAACGC TGAGTTTAAT CGTACCGAGC GTGAGGTTGA TGCCTCAGTG
GTGGTTAACC CAGGTGATAT TTTGGTTTCT TGGTCGGCTA CTCTGGATAC CTTTATTTGG
CGAGGCGAGC AAGGCGTTCT TAATCAGCAT ATATTTCGTG TCACTCCAAG CAAAATTGTG
AGTGTTCAAT ATTTATATTG GCTTTTAAAG TGGGCAATAA AGGTTCTCGC TGATAGTGAA
CATGCTCACG GGCTAGTTAT GGCGCATATC AATCGGGGGC CATTTCTAGC TCAGCCCATA
GGGCTTCCTC CGTTAACAGA GCAAAACAAA ATAGTCGTCA AAATAGCCGA ACTGATGGCT
CTGTGTGACC GGCTGGAGGC CCGGCAGGCC GATGCCGACA GCGCCCACGC CCAACTGGTG
CAAGCGCTGT TGGGCAGCCT GACGCAGGCC AGCGATGCCG CAGACTTTGC GCAAAGCTGG
CAGCGCTTGG CTGAGCACTT CCACACCCTA TTCACCACCG AATCCAGCAT CGACGCCCTC
AAGCAAACCC TGCTGCAACT GGCGGTGATG GGCAAGCTGG TGCCCCAAGA TTCTAGAGAT
GAGCCTGCGA GTGAGTTGTT GAAGCGGGTT TCGGAGGAAA AGGCGCGGTT GGTGGCAGAA
GGGAAGCTCA AGAAGCAGAA GCCTCTGGGC GATGTTGCTA TTTCCGATAT CCCGTTTGAT
GTACCAGATA ATTGGGCCTG GTCTCGAATT GGAGAAATTG CGCTTAATAC GGAGTACGGC
CTGTCTGAGA AAACCTTTGA CCTACAGGAT GGAGTTCCCG TTTTGAAAAT GGGTGACATA
CAAGAAGGAA GAGTGTTACT TGGCGGGCAG ATGGCCGTAA GCAAGAATAC AGAGGGTCTA
CCAGGGCTCT ATTTGGAAAC GGAAGATTTG CTTTACAATC GAACAAACAG CGCTGAACTG
GTCGGTAAAA CTGGAGTTTT CTTGGGGCAA GCGGGGGAAT ACTCCTTTGC TTCTTACTTG
ATTCGTATCA GATGCCTGAA GGAGCTGTTT TCTCCGCTCT ACCTGAATAT TTCGATGAAT
GCGCCAGGCT TTCGTGAAAC CCAAATAAAC CCGCATTTGA AGCAACAATG TGGGCAGGCA
AACGTTAATG GGACGATCAT GAAAAACATG CTGGTTTCCG TCCCGCCTCT CCCTGAACAA
CACCGCATCG TCGCCAAAGT CGATCAACTG ATGGCCCTCT GCGAGCAACT CAAAACCCGC
CTTAACCAGG CCCTGCAGGT GCACGAACAT CTGGCCAGTG CGCTGGTCGA GCAGGCCGTG
GCCTGA
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| Protein sequence | MTSLLTDNLP LLAGAPNGIK KLRELILELA VRGKLVPQDP EDLSARTGLD ASRTERAKAM
LEGKIKKEKP AMEVADSEQP FELPDGWAWC RIVDTGNYIN GLAFKPSDWS STGRPIIRIQ
NLSGRNAEFN RTEREVDASV VVNPGDILVS WSATLDTFIW RGEQGVLNQH IFRVTPSKIV
SVQYLYWLLK WAIKVLADSE HAHGLVMAHI NRGPFLAQPI GLPPLTEQNK IVVKIAELMA
LCDRLEARQA DADSAHAQLV QALLGSLTQA SDAADFAQSW QRLAEHFHTL FTTESSIDAL
KQTLLQLAVM GKLVPQDSRD EPASELLKRV SEEKARLVAE GKLKKQKPLG DVAISDIPFD
VPDNWAWSRI GEIALNTEYG LSEKTFDLQD GVPVLKMGDI QEGRVLLGGQ MAVSKNTEGL
PGLYLETEDL LYNRTNSAEL VGKTGVFLGQ AGEYSFASYL IRIRCLKELF SPLYLNISMN
APGFRETQIN PHLKQQCGQA NVNGTIMKNM LVSVPPLPEQ HRIVAKVDQL MALCEQLKTR
LNQALQVHEH LASALVEQAV A
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