| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4584 |
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| Symbol | |
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| ID | 5194980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5128618 |
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| End bp | 5130522 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640589066 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_001269888 |
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| Protein GI | 148549786 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.794949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA ATCTGATCCT GTGGTTGATC ATCGCAGCTG TCCTGGTGAC AGTGATGAAC
AACTTCTCCA GCCCTAACGA GCCGCAGACC CTCAACTACT CCGACTTCAT CCAGCAGGTC
AAGGATGGCA AAGTCGAGCG TGTGACCGTC GATGGCTACA TCATTACTGG CAAGCGCACC
GATGGCGACA ACTTCAAGAC TGTGCGCCCG GCCATCACCG ACAATGGCCT GATCGGCGAT
CTGGTCGACA ACCACGTGGT CGTCGAAGGC AAGCAGCCTG AGCAACAGAG CATCTGGACG
CAGTTGCTGG TGGCGAGCTT CCCGATCCTG GTGATCATTG CCGTGTTCAT GTTCTTCATG
CGCCAGATGC AAGGTGGCGC GGGCGGCAAG GGCGGGCCGA TGAGCTTCGG CAAGAGCAAG
GCGCGCCTGC TGTCCGAAGA CCAGGTCAAG ACCACGCTGG CTGACGTTGC GGGCTGCGAC
GAGGCCAAGG AAGAGGTTGG CGAGCTGGTC GAGTTCCTGC GCGATCCGGG CAAGTTCCAG
CGCCTGGGTG GCCGTATCCC GCGCGGTGTG CTGATGGTCG GCCCACCCGG TACCGGTAAG
ACCCTGCTGG CCAAGGCCAT CGCGGGCGAG GCGAAAGTAC CGTTCTTCAC CATTTCCGGT
TCGGACTTCG TGGAAATGTT CGTGGGTGTC GGTGCCAGCC GTGTGCGCGA CATGTTCGAG
CAGGCCAAGA AGCACGCCCC GTGCATCATC TTCATCGACG AAATCGACGC CGTTGGTCGC
CATCGTGGCG CCGGTATGGG CGGCGGTCAC GACGAGCGTG AGCAAACCCT CAACCAGTTG
CTGGTGGAGA TGGACGGCTT CGAGATGAAT GATGGCATCA TCGTCATCGC CGCCACCAAC
CGTCCGGATG TGCTCGACCC TGCGCTGCTG CGCCCCGGCC GCTTCGACCG TCAGGTGGTG
GTTGGCCTGC CGGACATTCG TGGTCGCGAG CAGATCCTCA AGGTGCACAT GCGCAAGGTG
CCGATCGGCG AGAACGTCAA CCCGGCGGTC ATCGCGCGGG GTACCCCAGG CTTCTCCGGT
GCCGACCTGG CCAACCTGGT CAACGAGGCT TCGCTGTTTG CCGCGCGTTC CAACAAGCGC
CTGGTCGAAA TGAAAGAGTT CGAGCTGGCC AAGGACAAGA TCATGATGGG CGCCGAGCGC
AAGACCATGG TCATGTCCGA AAAGGAAAAG AGAAACACTG CCTATCACGA GGCCGGCCAC
GCCATTGTCG GTCGCCTGGT GCCTGAGCAC GACCCGGTCT ACAAGGTTTC GATCATCCCG
CGTGGTCGTG CCTTGGGTGT GACCATGTTC CTGCCGGAAG AAGACCGCTA CAGCCTCTCC
AAGCGTGCGC TGATCAGCCA GATCTGCTCG CTGTATGGCG GCCGTATCGC CGAGGAGATG
ACCTTGGGCT TCGATGGCGT GACCACTGGC GCGTCCAACG ACATCATGCG CGCCAGCCAG
CTCGCTCGTA ACATGGTGAC CAAGTGGGGC CTGTCCGAGA AGCTCGGCCC GCTGATGTAT
GCAGAGGAAG AGGGCGAGGT GTTCCTCGGC CGCAGTGCCG GTAGCCAGCA TGCCAGCGTG
TCCGGCGAGA CTGCCAAATT GATCGACTCC GAGGTGCGCA GCATCATCGA TCAGTGCTAT
GCCACTGCCA AGCAGTTGCT GATCGACAAC CGCGACAAGC TCGAGGCGAT GACCGAAGCG
CTGATGAAGT ACGAGACCAT CGATGCCGAT CAGATTGACG ACATCATGGC TGGGCGCACA
CCACGTGAGC CGCGTGATTG GGACGATGAC AAGCACTCGG GCACGCCTGC GGCCCAGGAT
GAGCGTCCGG AATCGCCAAT CGGCGGCCCA GCGGCTGAAC ACTAA
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| Protein sequence | MAKNLILWLI IAAVLVTVMN NFSSPNEPQT LNYSDFIQQV KDGKVERVTV DGYIITGKRT
DGDNFKTVRP AITDNGLIGD LVDNHVVVEG KQPEQQSIWT QLLVASFPIL VIIAVFMFFM
RQMQGGAGGK GGPMSFGKSK ARLLSEDQVK TTLADVAGCD EAKEEVGELV EFLRDPGKFQ
RLGGRIPRGV LMVGPPGTGK TLLAKAIAGE AKVPFFTISG SDFVEMFVGV GASRVRDMFE
QAKKHAPCII FIDEIDAVGR HRGAGMGGGH DEREQTLNQL LVEMDGFEMN DGIIVIAATN
RPDVLDPALL RPGRFDRQVV VGLPDIRGRE QILKVHMRKV PIGENVNPAV IARGTPGFSG
ADLANLVNEA SLFAARSNKR LVEMKEFELA KDKIMMGAER KTMVMSEKEK RNTAYHEAGH
AIVGRLVPEH DPVYKVSIIP RGRALGVTMF LPEEDRYSLS KRALISQICS LYGGRIAEEM
TLGFDGVTTG ASNDIMRASQ LARNMVTKWG LSEKLGPLMY AEEEGEVFLG RSAGSQHASV
SGETAKLIDS EVRSIIDQCY ATAKQLLIDN RDKLEAMTEA LMKYETIDAD QIDDIMAGRT
PREPRDWDDD KHSGTPAAQD ERPESPIGGP AAEH
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