Gene Pput_4579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4579 
Symbol 
ID5190591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5124305 
End bp5124814 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content56% 
IMG OID640589059 
Producthypothetical protein 
Protein accessionYP_001269883 
Protein GI148549781 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.312509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCTT CGCCCATTTT TTATTTGCAC AGCATGCACG AGGGGGTTCA GGTGTCGAGC 
AAGCTAGAAC AGTTGCAGGC CTTGTTGGCC CCGGTTGTCG AGGGTCTGGG CTATCAGTGC
TGGGGGATCG AATACGTTTC CCAGGGTAAG CATTCGGTAC TGCGCATCTA CATCGACAAG
GAAGGCGGTA TTCTGGTGGA CGACTGCGAA GCAGTCAGCC GTCAGGCCAG CGCAATCCTC
GATGTGGAAG ATCCAATCAG CAGTGAGTAC ACCCTCGAGG TGTCTTCTCC AGGCATGGAT
CGCCCACTGT TCACGCTGGA ACAGTTTGCC TCGCATGCCG GCGAACAAGT GAAGATCAAG
CTGCGCTCAC CCTTCGAGGG TCGTCGTAAC TTCCAGGGCC TTCTCCGCGG TGTGGAGGAG
CAGGATGTGG TGGTCCAGGT GGACAACCAG GAGTTCCTGT TACCGATCGA CTCGATCGAC
AAGGCCAATA TTATTCCCAG TTTTGACTGA
 
Protein sequence
MGASPIFYLH SMHEGVQVSS KLEQLQALLA PVVEGLGYQC WGIEYVSQGK HSVLRIYIDK 
EGGILVDDCE AVSRQASAIL DVEDPISSEY TLEVSSPGMD RPLFTLEQFA SHAGEQVKIK
LRSPFEGRRN FQGLLRGVEE QDVVVQVDNQ EFLLPIDSID KANIIPSFD