Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4566 |
Symbol | pgi |
ID | 5194702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5106714 |
End bp | 5108378 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640589046 |
Product | glucose-6-phosphate isomerase |
Protein accession | YP_001269870 |
Protein GI | 148549768 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.489818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0824899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTATT ACCGTACACC CCACGATGTG ACGGCCCTGC CCGCCTGGCA GGCGCTTCAG AAACACCGCG ACGCCATGCA AAGCTTTAGC ATGCGCGAAG CCTTCGCCGC CGATGCCAAG CGCTTCGACC AGTTTTCCCT TAGCGCTTGC GGCCTGTTCC TCGACTACTC AAAAAACCTG ATCACTGAGC AAAGCCGCGA CCTGCTGGTC AGCCTGGCCA ATGAAGTGGG CCTGCAAGAC GCCATCAAGT CGATGTTCAG CGGTGAGATC ATCAACGCCT CCGAAGGCCG CCCGGTGCTT CACACCGCCT TGCGCCGGCC CGTAGGTGAC AAACTCAGCG TCAACGGCGT GAACGTCATG CCGGAAGTGC ACAAGGTGCT CAACCAGATT ACCGAACTGG TCGGCCGCAT TCACGATGGC CTGTGGCGCG GCTACAGCGA AAAGCCGATC ACCGACGTGG TCAACATTGG CATTGGCGGT TCGTTCCTGG GCCCCGAGCT GGTGTCCGAA GCGCTGCTAC CCTATGCCCA GCGCGGCGTG CGCTGCCACT ACCTGGCCAA TATCGACGGC AGCGAGTTCC ACGAGCTGTC GGCCAACCTG CGCGCCGAAA CCACCCTGTT CATCGTCTCG TCGAAGTCGT TCAACACCCT CGAGACGCTG AAAAACGCCA TGGCCGCGCG TACCTGGTAC CTGGCCCAAG GCGGCTCGGA AGCCGAGCTG TACCGCCATT TCATTGCAGT TTCCAGCAAC AAGGCCGCTG CTGTAGCGTT CGGTATCCGC GAAGAAAACA TCTTCCCGAT GTGGGACTGG GTGGGCGGGC GCTACTCGCT GTGGTCGGCC ATCGGCCTGC CGATCGCCCT GGCCATCGGC ACTGCCAACT TCAAGGAACT GCTGTCCGGC GCCTACACCA TGGACCAGCA CTTCCAGACC GCACCGTTCG ACAAGAACAT GCCGGTGCTA CTGGCCTTGC TGGGCGTGTG GTATGGCAAC TTCTGGGACG CGAACAGTCA CGCGATCCTG CCGTACGACC ACTACCTGCG CAACATCACC AAGCACTTGC AGCAGCTGGA CATGGAATCC AACGGCAAGA GCGTATTGCA AGACGGTACC CCGGTGAAGA CCGACACCGG GCCGGTAATC TGGGGCGGCG TGGGCTGCAA CGGCCAGCAT GCCTACCACC AGTTGCTGCA CCAAGGCACC CAGTTGATTC CGGCCGACTT CATCGTGCCG GTGGTGAGCT TCAACCCGGT GGCCGACCAC CACCAGTGGC TGTACGCCAA TTGCCTGTCG CAGAGCCAGG CGCTGATGCT GGGCAAAACC CGCGAGGAAG CCGAAGCCGA ATTGCGCGCT AAAGGCCTCA ACGAAGCGGA CATCGAAAAG CTGGCCCCGC ACAAGGTAAT CCCGGGTAAC CGCCCGAGCA ACACGTTGGT GGTCGAGCGC ATCAGCCCGC GCCGCCTGGG CGCGTTGGTG GCGATGTACG AGCACAAGGT GTTCGTACAG AGCGTTATCT GGGGTATCAA CGCCTTCGAC CAGTGGGGCG TTGAGCTGGG CAAGGAACTG GGCAAGGGCG TTTACCAGCG CTTGGTCGGC AGCCTGGAAG ACAGCGCCGA AGACGGTTCC ACCCAAGGCC TGATCAACTA CTTCCGCGGC CGTCACCGCG GTTGA
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Protein sequence | MAYYRTPHDV TALPAWQALQ KHRDAMQSFS MREAFAADAK RFDQFSLSAC GLFLDYSKNL ITEQSRDLLV SLANEVGLQD AIKSMFSGEI INASEGRPVL HTALRRPVGD KLSVNGVNVM PEVHKVLNQI TELVGRIHDG LWRGYSEKPI TDVVNIGIGG SFLGPELVSE ALLPYAQRGV RCHYLANIDG SEFHELSANL RAETTLFIVS SKSFNTLETL KNAMAARTWY LAQGGSEAEL YRHFIAVSSN KAAAVAFGIR EENIFPMWDW VGGRYSLWSA IGLPIALAIG TANFKELLSG AYTMDQHFQT APFDKNMPVL LALLGVWYGN FWDANSHAIL PYDHYLRNIT KHLQQLDMES NGKSVLQDGT PVKTDTGPVI WGGVGCNGQH AYHQLLHQGT QLIPADFIVP VVSFNPVADH HQWLYANCLS QSQALMLGKT REEAEAELRA KGLNEADIEK LAPHKVIPGN RPSNTLVVER ISPRRLGALV AMYEHKVFVQ SVIWGINAFD QWGVELGKEL GKGVYQRLVG SLEDSAEDGS TQGLINYFRG RHRG
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