| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4553 |
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| Symbol | |
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| ID | 5193250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5092095 |
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| End bp | 5092979 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640589033 |
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| Product | periplasmic binding protein |
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| Protein accession | YP_001269857 |
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| Protein GI | 148549755 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.697431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000125812 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGCGCC GTCCAGCTGC TTTTCTTGCT CTGTGTGCAA GCCTTGTGCT CTCTACCCAA
GCCTTGGCAG CCGAGCTGCC GCAACGCTGG GTCAGCGCGG GTGGCGCCTT GAGCGAGTGG
ATAACCGCAT TGGGAGGTGA AGCGCGCCTG GTCGGTGTGG ACACTACCAG TCAGCACCCG
GCCTCGTTGA AAGCCTTGCC CAGTGTGGGT TATCAGCGGC AACTGTCGGC CGAAGGCATC
CTCAGCCTGC GCCCGGATGT GCTGGTGGGC ACCGAGGAAA TGGGGCCGCC ACCGGTACTG
GCGCAAATCC GCAAGGCCGG TGTGCGGGTC GAGTTGTTCT CCAGCAAGGC CGAGCTGCCG
GCTGTAGATG AAAACCTCAG GCACCTGGGG CAGTTGCTCG GTGCAGAGCA GCAAGCGTCC
GCGCTTGCTG CGGACTACCG CCAGCGGCTC GATGCGTTGC AGGCCAACGT CAAGCTGGCC
CAGGCCGGGC AGCAGGCTCC CGGGGTGTTG CTGCTGGTCG GCCATGCCGG GGCCAAGCCG
CTGATCGCCG GGCAAGGCAC TGCCGGTGAC TGGCTGCTGA GCCAGGCGGG TGGGCGTAAC
CTGGCCGCGC ACCCAGGCTA CAAGAACTTC TCCAACGAAG CCTTGGCGGC GCTTGACCCG
GATGTGATCG TGTTTTCCGA CCGGGCGCTG GCCGATGAAC AGGCCTTGCA GGCGCTGTTG
AAAGAAAACC CCGCGCTGGC TGCCTCGCGG GCCGTGCGTG AGAAACGCCT GGTCTCACTG
GACCCGACGC TGCTGGTCGG CGGGCTCGGG CCTCGGCTAC CGGCGACCTT GCAGTCGCTG
GCAGCCACCT TCTACCCGGC TGCTCAGGCC AGCTTCGCAC AATGA
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| Protein sequence | MMRRPAAFLA LCASLVLSTQ ALAAELPQRW VSAGGALSEW ITALGGEARL VGVDTTSQHP
ASLKALPSVG YQRQLSAEGI LSLRPDVLVG TEEMGPPPVL AQIRKAGVRV ELFSSKAELP
AVDENLRHLG QLLGAEQQAS ALAADYRQRL DALQANVKLA QAGQQAPGVL LLVGHAGAKP
LIAGQGTAGD WLLSQAGGRN LAAHPGYKNF SNEALAALDP DVIVFSDRAL ADEQALQALL
KENPALAASR AVREKRLVSL DPTLLVGGLG PRLPATLQSL AATFYPAAQA SFAQ
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