Gene Pput_4543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4543 
SymbolilvH 
ID5194719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5080915 
End bp5081406 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content59% 
IMG OID640589023 
Productacetolactate synthase 3 regulatory subunit 
Protein accessionYP_001269847 
Protein GI148549745 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0246688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000231458 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGGCACA TCATTTCCCT GCTGCTGGAA AACGAACCAG GTGCGTTGTC CCGCGTGGTC 
GGCCTGTTCT CCCAGCGCAA CTACAACATT GAAAGCCTGA CTGTAGCGCC AACCGAAGAC
CCGACCCTGT CGCGTCTGAC GCTGACCACC GTTGGCCATG ACGAAGTGAT CGAACAGATC
ACCAAGAACC TGAACAAGCT GGTCGAAGTG GTCAAGCTTG TCGACCTGTC GGAAAGCGCT
CACATCGAGC GTGAACTGAT GCTGGTCAAG GTCAAGGCCA CCGGTGCCCA GCGTGCCGAG
ATCAAGCGCA CCACGGATAT CTTCCGTGGC CAGATCGTCG ACGTGACCGC CAGCGTGTAC
ACCGTGCAGC TGAGCGGTAC CAGCGACAAA CTGGACAGCT TCATCCAGGC GATCGGCACT
GCATCGATTC TGGAAACCGT GCGCAGCGGC GTTACCGGCA TTGCCCGTGG CGACAAAGTG
CTCAGCATCT AA
 
Protein sequence
MRHIISLLLE NEPGALSRVV GLFSQRNYNI ESLTVAPTED PTLSRLTLTT VGHDEVIEQI 
TKNLNKLVEV VKLVDLSESA HIERELMLVK VKATGAQRAE IKRTTDIFRG QIVDVTASVY
TVQLSGTSDK LDSFIQAIGT ASILETVRSG VTGIARGDKV LSI