Gene Pput_4525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4525 
Symbol 
ID5193281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5051844 
End bp5052608 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content66% 
IMG OID640589000 
Producthypothetical protein 
Protein accessionYP_001269829 
Protein GI148549727 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.542262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.388849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACCT TGCTCGCGTT TTACCAGAAC ATTGGCCCGG CACTGTCGTT GCTGGTTGTA 
CTGACCTTTC TGCTGGCGGG CGCAGTGAAG GGGGTCATCG GCCTGGGCCT GCCGACCATT
GCCATGGGCC TGTTGGGCCT GGCTATGCCA CCTGCGCAGG CAGCCGCGTT GTTGATCGTG
CCCTCGACAC TCACCAACCT GTGGCAGCTG GCCAGCGGCG GGCACCTGCG AGGGTTGTTG
GTCCGTCTGG GGCCAATGCT GGCATTGATC TTTGTCGGCA CTTTGCTGGG CAGCGCCTGG
CTGGGAATCA ACAGTGGCCC ATGGGCTGGG CACGCGTTGG GGGGCGCCTT GCTGGTCTAT
GCGTTGTATG GGTTGGTCGG CCCGGGCCTG CAGGTGGCAC CGGGACACGA GCGCTGGCTG
GGACCGCTTT GCGGGCTGGT CACGGGTGTG GTCACGGCGT CGACCGGGGT GTTCGTGATG
CCAGCGGTGC CTTACCTGCA GAGCCTGGGC TTGAGCCGCG AGCAGATGAT CCAGGCCCTG
GGCCTGTCGT TTACGGTGTC GACCCTGGCC TTGGCCCTAG GCCTGGCCGG GCAGGATGCC
TTGGGTGGCC AGGCGTTGGG GGCGTCGCTG CTGATGCTGG CGCCGGCTTT GCTCGGCATG
CTGGCGGGCC AGTGGCTGCG TCAGCGGATC AGCGCGCTGC TGTTCAAGCG TTGCTTTTTC
ATCGGGTTGG CCGCACTCGG CGTCCATCTG CTGATCAACG GCTAG
 
Protein sequence
MTTLLAFYQN IGPALSLLVV LTFLLAGAVK GVIGLGLPTI AMGLLGLAMP PAQAAALLIV 
PSTLTNLWQL ASGGHLRGLL VRLGPMLALI FVGTLLGSAW LGINSGPWAG HALGGALLVY
ALYGLVGPGL QVAPGHERWL GPLCGLVTGV VTASTGVFVM PAVPYLQSLG LSREQMIQAL
GLSFTVSTLA LALGLAGQDA LGGQALGASL LMLAPALLGM LAGQWLRQRI SALLFKRCFF
IGLAALGVHL LING