| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4518 |
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| Symbol | |
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| ID | 5194556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5043899 |
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| End bp | 5044618 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588993 |
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| Product | protocatechuate 3,4-dioxygenase, beta subunit |
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| Protein accession | YP_001269822 |
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| Protein GI | 148549720 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCC AGGACAACAG CCGCTTCGTG ATCCGTGATC GCAACTGGCA CCCTAAAGCC
CTTACGCCTG ACTACAAGAC CTCCGTTGCC CGCTCGCCGC GCCAGGCACT GGTCAGCATT
CCGCAGTCGA TCAGCGAAAC CACTGGTCCG GACTTTTCCC ACCTGGGCTT CGGCGCCCAC
GACCATGACC TGCTGCTGAA CTTCAATAAT GGTGGCCTGC CCATTGGCGA GCGCATCATC
GTCGCCGGCC GTGTCGTCGA TCAGTACGGC AAGCCTGTGC CGAACACTCT GGTAGAGATG
TGGCAAGCCA ACGCCGGCGG CCGCTATCGC CACAAGAACG ACCGCTACCT GGCGCCGCTG
GACCCGAACT TTGGTGGTGT TGGCCGGTGC CTGACCGACC GCGACGGCTA CTACAGCTTC
CGCACCATCA AGCCGGGCCC GTACCCATGG CGCAACGGCC CGAACGACTG GCGCCCGGCG
CATATCCACT TCGCCATCAG CGGCCCATCG ATCGCCACCA AGTTGATCAC CCAGCTGTAC
TTCGAAGGTG ACCCGCTGAT CCCGATGTGC CCGATCGTCA AGTCGATCGC CAACCCGCAA
GCCGTGCAGC AGTTGATCGC CAAGCTCGAC ATGAGCAACG CCAACCCGAT GGACTGCCTG
GCCTACCGCT TCGACATCGT GCTGCGCGGC CAGCGCAAGA CCCACTTCGA AAACTGCTGA
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| Protein sequence | MPAQDNSRFV IRDRNWHPKA LTPDYKTSVA RSPRQALVSI PQSISETTGP DFSHLGFGAH
DHDLLLNFNN GGLPIGERII VAGRVVDQYG KPVPNTLVEM WQANAGGRYR HKNDRYLAPL
DPNFGGVGRC LTDRDGYYSF RTIKPGPYPW RNGPNDWRPA HIHFAISGPS IATKLITQLY
FEGDPLIPMC PIVKSIANPQ AVQQLIAKLD MSNANPMDCL AYRFDIVLRG QRKTHFENC
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