| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4516 |
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| Symbol | |
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| ID | 5190685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5042010 |
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| End bp | 5043095 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640588991 |
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| Product | tRNA (uracil-5-)-methyltransferase |
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| Protein accession | YP_001269820 |
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| Protein GI | 148549718 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCTG CTTTCGACCC CTCCTCCTAC GCCACCCAAC TGGACGCCAA GGTGGCCCGG
CTGCGCGAGC TGCTGGCGCC ATTCGGCGCG CCGGAACCGG CTGTTTTCGA CTCACCGCGC
GAGCATTACC GCCTGCGCGC CGAGTTCCGT CTGTGGCGCG AGGATGGCCA GCGCCACTAC
GCCATGTTCG CCCCAGGCGA GAAGCACAAA GCAATCCTGA TCGACGATTT CCCCATTGCC
AGCGAACGCA TCAACGCGTT GATGCCACGC CTGAAGGCAG CCTGGCAGGC CAGCGAAGAA
CTGGGCAACC GCCTGTTCCA GGTGGAGTTC CTCACCACCC TGGCTGGCGA TGCGATGATC
ACGATGTGCT ATCACCGCCC GCTGGACGAG GCCTGGGAAG TGGAAGCACG GCAACTGGCT
GAAGCGCTGG GGGTGAGCGT CATCGGCCGT TCCAAGGGCA AGCGCCTGGT TATCGGCCGC
GACTACGCGG TGGAAAAACT CGATGTGGCT GGCCGCGTGT TCAGTTACCG CCAGCCGGAG
GGTGCGTTCA CTCAGCCCAA CGGCGCAGTG AACCAGAAGA TGCTCAGCTG GGCCTTCGAG
GCCATGGGCG ATCGTGAGGA TGACTTGCTG GAATTGTATT GCGGCAACGG CAACTTCACC
CTGCCGCTGG CCACGCGTGT ACGCCAGGTG CTGGCCACCG AAATCAGCAA GACGTCGGTC
AATGCCGCAC TGAGCAACCT TGACGAAAAC GCTGTGGATA ACGTGCGGCT GGTACGCTTG
TCGGCAGAGG AGCTGACCCA GGCACTGAAT GAGGTGCGGC CGTTCCGTCG CCTGGAAGGC
ATCGACCTGA AGAGTTATCA GTTCGGTACC GTGTTCGTCG ACCCACCGCG GGCAGGGATG
GACCCGGATA CCTGCGAGCT GACCCGGCGT TTCGAACGCA TCCTGTACAT CTCGTGCAAC
CCGGAAACGC TGGCAGCGAA CATCGCCCAG TTGCAGGACA CCCACCGCAT CGAGCGCTGT
GCATTGTTTG ACCAGTTCCC GTACACCCAC CATATGGAGA GTGGGGTTCT GCTGGTTCGG
CGCTGA
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| Protein sequence | MSAAFDPSSY ATQLDAKVAR LRELLAPFGA PEPAVFDSPR EHYRLRAEFR LWREDGQRHY
AMFAPGEKHK AILIDDFPIA SERINALMPR LKAAWQASEE LGNRLFQVEF LTTLAGDAMI
TMCYHRPLDE AWEVEARQLA EALGVSVIGR SKGKRLVIGR DYAVEKLDVA GRVFSYRQPE
GAFTQPNGAV NQKMLSWAFE AMGDREDDLL ELYCGNGNFT LPLATRVRQV LATEISKTSV
NAALSNLDEN AVDNVRLVRL SAEELTQALN EVRPFRRLEG IDLKSYQFGT VFVDPPRAGM
DPDTCELTRR FERILYISCN PETLAANIAQ LQDTHRIERC ALFDQFPYTH HMESGVLLVR
R
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