Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4487 |
Symbol | |
ID | 5192468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5013230 |
End bp | 5014111 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640588962 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001269791 |
Protein GI | 148549689 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTCA AACAACTGCG CAGCTTTATC GAAGTGGTCC ACCGCGGCGG TTTTACCCAG GCGGCACAGA CCCTGCACAT CAGCCAGTCG GCCGTGAGCA AGCAGGTGGC CCAGCTTGAG CAAGATGTGG GCCAGCCGCT GCTGGAGCGC CAGGCGTCGC ACCTGCACCT GACCGCTGCC GGGCGCATCG TACTGGAGCG TGGCGAAGCC CTGCTGCGCC AGCGCCAGGC GCTGCTCAAC GAGCTGGACG ATCTCAGCCA GATGGAGCGT GGCGAACTAC GCCTGGGCTT GCCGATGCTT GGCAGCGACA CGTTGTTCGC CGGCTTGTTC GCCGAGTACC GGCGGCGCCA TCCGAACATC GCTATCCAGC TGCTTGAAGG CGGCAGCCGC AACGTCGAAC AGGCCGTCAG AAGTGGCGAA CTGGAACTGG GCGGCTGCTT GACGCCCACC GACGAGGCAT TCGACTACCA GCCCTTCTGC AACGAACCGC TGGATGCCTT GCTGCCGGCT GGCCATGCCC TGGCGGGCCT GGACGCCGTG GGCCTGAGGC AACTGGCCGA TACACCGTTC CTGCTGTACC AGCGCAGTTT CGTGCTCAAC GATCGGCTGC TCAAGGCGTG CCAGCAGCAG GGCTTCACCC CCAAGGAAGG CGGGCGCAGC GGCCAGGCGG ATTTTTTGGC AGCGCTGGTG GCAGCGGGCC AGGGCGTGGT GATGCTGCCC CGGGTGGTGG CAAAAGCGCT GGAGCGCCCC GGGGTGGTGC GTGTGCCGTT GAATGCGCAG GAGGATTTAC GTTGGGATAT CGCGTTTATC TGGCGACGCG GCGCCTACCT GTCACGGGCG GCGCAGGCGT GGTTGGCCTT GTTGCGCGAG CCCCATGGCT AA
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Protein sequence | MEFKQLRSFI EVVHRGGFTQ AAQTLHISQS AVSKQVAQLE QDVGQPLLER QASHLHLTAA GRIVLERGEA LLRQRQALLN ELDDLSQMER GELRLGLPML GSDTLFAGLF AEYRRRHPNI AIQLLEGGSR NVEQAVRSGE LELGGCLTPT DEAFDYQPFC NEPLDALLPA GHALAGLDAV GLRQLADTPF LLYQRSFVLN DRLLKACQQQ GFTPKEGGRS GQADFLAALV AAGQGVVMLP RVVAKALERP GVVRVPLNAQ EDLRWDIAFI WRRGAYLSRA AQAWLALLRE PHG
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