Gene Pput_4478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4478 
Symbol 
ID5190497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5002453 
End bp5003259 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content66% 
IMG OID640588953 
Producthypothetical protein 
Protein accessionYP_001269782 
Protein GI148549680 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.242324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCAC GTCAAGCCTG CCTGGCCTGC CTGGAACGCG AGCCTGTCGA CCTGCTGGAA 
GCCGCATTGT GGATTGCTGC CGAGCACGAC CCGGGTGTCG AGCCCGCGGC CAGCCTTGCT
GCGCTGCACG ACCTGCAGCG CGAGATAAGC GCCAACCTGC CGATGCTTCC ACTCTGCGAA
CTGGCCCAGC CACTGCTGCG CCAGCTCAAT GCGCTGGGCT TTCAGCAGGA TGAATATCAC
CCCCTGCGCC CCCATGCGGC GATGATGGAC AAGGTATTGC AGCGCCGCCG CGGCCAACCA
CTGACCCTGG CCATCCTCGC GTTGGAACTG GCCAGGCGCC TGTCCATACC GCTGGAGGGT
GTAGGCTTCC CTGGCCATTT CCTGCTGCGC GTGCCGGGTG CCGACCACCT GCTCGATCCC
TGCGGCGGCC GGCGCCTGTA CCCCAGCGAC TGCCGCGAAT TGCTGGCGCG CCAGTTCGGC
CCGCACCTGG CGCTGACCGC CGAGCACCTG CGCAGCGCCA GCCCGCTGCA GATGCTGCAA
CGCCTGTCAC GCAACCTGCG CCAACTGCAC ATCAGTAACG ACAACCACCT GGCGGCGTTG
ATCGACGCAG AGCGCATCAT GCAGTTGGGC CCGGTGCAGG TGAGCGACTA CATGACCCGC
GCCTCGCTCT ACCATCATCT GGATTGCCCA CAGGCCGAGC GCTTCGACCT GGAGCATGCG
TTGCTGCTGA CGGAAGACCC GGTCCAGCGC CTGAAGCTGT CCGAGCGAAT CGGCAAGCTT
CCGGCGACGA ACCGTTCACT TCACTGA
 
Protein sequence
MKPRQACLAC LEREPVDLLE AALWIAAEHD PGVEPAASLA ALHDLQREIS ANLPMLPLCE 
LAQPLLRQLN ALGFQQDEYH PLRPHAAMMD KVLQRRRGQP LTLAILALEL ARRLSIPLEG
VGFPGHFLLR VPGADHLLDP CGGRRLYPSD CRELLARQFG PHLALTAEHL RSASPLQMLQ
RLSRNLRQLH ISNDNHLAAL IDAERIMQLG PVQVSDYMTR ASLYHHLDCP QAERFDLEHA
LLLTEDPVQR LKLSERIGKL PATNRSLH