Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4478 |
Symbol | |
ID | 5190497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5002453 |
End bp | 5003259 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640588953 |
Product | hypothetical protein |
Protein accession | YP_001269782 |
Protein GI | 148549680 |
COG category | [S] Function unknown |
COG ID | [COG2912] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.242324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCCAC GTCAAGCCTG CCTGGCCTGC CTGGAACGCG AGCCTGTCGA CCTGCTGGAA GCCGCATTGT GGATTGCTGC CGAGCACGAC CCGGGTGTCG AGCCCGCGGC CAGCCTTGCT GCGCTGCACG ACCTGCAGCG CGAGATAAGC GCCAACCTGC CGATGCTTCC ACTCTGCGAA CTGGCCCAGC CACTGCTGCG CCAGCTCAAT GCGCTGGGCT TTCAGCAGGA TGAATATCAC CCCCTGCGCC CCCATGCGGC GATGATGGAC AAGGTATTGC AGCGCCGCCG CGGCCAACCA CTGACCCTGG CCATCCTCGC GTTGGAACTG GCCAGGCGCC TGTCCATACC GCTGGAGGGT GTAGGCTTCC CTGGCCATTT CCTGCTGCGC GTGCCGGGTG CCGACCACCT GCTCGATCCC TGCGGCGGCC GGCGCCTGTA CCCCAGCGAC TGCCGCGAAT TGCTGGCGCG CCAGTTCGGC CCGCACCTGG CGCTGACCGC CGAGCACCTG CGCAGCGCCA GCCCGCTGCA GATGCTGCAA CGCCTGTCAC GCAACCTGCG CCAACTGCAC ATCAGTAACG ACAACCACCT GGCGGCGTTG ATCGACGCAG AGCGCATCAT GCAGTTGGGC CCGGTGCAGG TGAGCGACTA CATGACCCGC GCCTCGCTCT ACCATCATCT GGATTGCCCA CAGGCCGAGC GCTTCGACCT GGAGCATGCG TTGCTGCTGA CGGAAGACCC GGTCCAGCGC CTGAAGCTGT CCGAGCGAAT CGGCAAGCTT CCGGCGACGA ACCGTTCACT TCACTGA
|
Protein sequence | MKPRQACLAC LEREPVDLLE AALWIAAEHD PGVEPAASLA ALHDLQREIS ANLPMLPLCE LAQPLLRQLN ALGFQQDEYH PLRPHAAMMD KVLQRRRGQP LTLAILALEL ARRLSIPLEG VGFPGHFLLR VPGADHLLDP CGGRRLYPSD CRELLARQFG PHLALTAEHL RSASPLQMLQ RLSRNLRQLH ISNDNHLAAL IDAERIMQLG PVQVSDYMTR ASLYHHLDCP QAERFDLEHA LLLTEDPVQR LKLSERIGKL PATNRSLH
|
| |