| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4465 |
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| Symbol | |
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| ID | 5191323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4991764 |
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| End bp | 4994154 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588940 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001269769 |
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| Protein GI | 148549667 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCT CCCCGCGTTG CGTCCCTCTC TGGTTCGGCC TTGTTGCGCT CCCGGCCTTC
GCTGTCGCCC CCCTGGCAAC CGCGGCCGAG CAGCTGCAGG CCTATGCCTT CGCCCAGCCG
GCCCAACCCT TGGCCCAGGC CCTGAACGCC TTCAGCCGCA CCACTGGCCA GAGCGTGGTC
TACACCCTCG AGCTGCCGGG CGTGCAAGCG CCAGCGCTGA AGGGTCGGTT CAGCGCCGAG
CAGGCGCTGC AACAACTGCT GGGCAACGCT GGGCTGGCCT GGCGCCGCGT CGACGCACGT
ACCCTGACCC TCGAACCTGC AGACACCTCC GGTGCCCTCA ACCTGCAGGC CACCACCGTG
ACCTCGCAAC AGGACGACTA CAGCTACCAG CCCCTGGCCA GCGCTTCGAT CATGCGCGGG
CAGGGCCCGA ACCAGGACAT CCCCCAGGCA ATCAACGTGG TACCGGCCCA GGTCATCCGC
GACCAGGCCC CGCGCAACCT CGATGACGCC CTGGCCAACG TCAGCGGCAT TACCCAGGGC
AACAACTTCG GCGGCACGTC CGACACGGTG ATGAAACGTG GCTTTGGCGA CAACCGCGAC
GGCTCGATCA TGCGCGATGG CATGCCCGTG GTGCAGGGCC GCAACCTCAA CGCCAGCACC
GAGCGGGTTG AAGTGCTCAA GGGGCCTGCC TCGCTGCTGT ACGGTATCCA GGACCCGGGT
GGGGTCATCA ACGTGGTCAG CAAGCGTCCG CAGTTGCAGC AGTACAACGC CCTGACCGTG
CGCGGCTCGA CCTATGGCAG CGGCAAGAAC GGCAGCGGTG GCGGGCTCGA CAGCACGGGC
GCACTGGGTG ACAGCAACTT CGCCTACCGC CTGGTTGTCG ACCACGAAGA CGAGGACTAC
TGGCGCAACT ACGGTGTGCA CCGCGAATCG CTGGTGGCAC CGTCGCTGGC TTGGCTGGGC
GAAGACACCC AGGTGGTGCT GGCCTACGAG CACCGTGAGT TTCTCTATCC CTTCGACCGT
GGCACCGCGT TCGGCAACAA CGGCCACCCG CTGAACATCC CTGCCACGCG CCGCCTGGAC
GAGCCGTTCA ACGACATGGA AGGGCGCTCC GACCTGTATC GCCTGGAAGT CGACCATCAG
TTGGCCGATG ACTGGAAGCT GCACTTCGGC TACAGCTTCA ATCGTGAGAC CTACGATGCC
AGCCAGGTTC GCGTGACCGG CGTCAACGAA ACCCAAGGCA CGCTGACACG CAGCATCGAC
GGCACTCACA ACGCCATGAG CCGTGACCAG TTCGTGACCC TGAGTCTCAA TGGCAATGTC
GAGCTGGCGG GGATGCAGCA TGACCTGCTG TTCGGCATCG ACCATGAAGA CCGCAAGATC
TTTCGCGGTG ACCTGATTCG CCAGACGCCA CAGTCCACGT TCAGTTATCT GGACCCGGTC
TACGGACAGG AAGTGGAGGG CACCAACGTG CGAGCCAGCG ACAGCGACCA GACCGACAAG
CTGCGCACCG ATGCGCTGTT CGTGCAGGAC GCGCTGCACC TCAATGAGCA CTGGATCCTT
GTAGCAGGTG CGCGTTTCCA GCAGTACGAC CAGTACGCTG GCCGCGGTCG CCCGTTCAAG
GCCAATACCG ACATCAGTGG CCAGGCTTGG GTACCCCACG CCGGTATCGT TTACAAAGTC
GACGACCAGC TCTCGTTCTA TGGCAGCTAC AGCGAGTCGT TCAAGCCCAA CTCGACCATC
GCGCCGCTGA CCGGCAATGT CGTGCTCGAC GCCTCGGTGG CACCTGAGGA GGGCAAGTCG
TGGGAGCTGG GCGCCAAGCT CGACATGCCA GGCCGCATCA CAGGCACCCT GGCATTGTTC
GATATCACCA AGCGCAATGT ACTGGTCTCG AACTTTGACG CCGTCACAAG CGAGACGGTC
TACAGCAATG CGGGTGAGGT CAGTTCACGC GGTGTGGAAC TCGACGTGAC CGGCCAGATC
AGCGAGCGCT GGAGCCTGAT CGGCAGCTAT GCACTGACCG ATGCCAAGGT CACCAAGGAC
CCTGATCTTG AGGGCAATCG CCTGCAGAAC GTGGCCCGGC ACAGCGGCTC GCTGTCGGCG
GTGTATGACT TTGGCAGCTT GTTCGGGGGT GACCGGCTGC GCTTCGGTGC CGGCGCCCGT
TATGTGGGCG AGCGTTCGGG TAACGCGACC AATACCTTCG ACCTGCCGAG CTATACCGTT
GCCGATGCGT TTGCCACTTA TGAAACCAAA CTCGACGAAC ACAACGTGCG CCTGCAACTG
AACGTGAAGA ACCTGTTCGA CAAGGTGTAT TACAGCTCGG CGGTGAACCA GTACTTTGTG
GCGATTGGCG ATGCGCGGCA GGTCAGTTTG TCGAGCACCT TCGAGTTCTA G
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| Protein sequence | MKFSPRCVPL WFGLVALPAF AVAPLATAAE QLQAYAFAQP AQPLAQALNA FSRTTGQSVV
YTLELPGVQA PALKGRFSAE QALQQLLGNA GLAWRRVDAR TLTLEPADTS GALNLQATTV
TSQQDDYSYQ PLASASIMRG QGPNQDIPQA INVVPAQVIR DQAPRNLDDA LANVSGITQG
NNFGGTSDTV MKRGFGDNRD GSIMRDGMPV VQGRNLNAST ERVEVLKGPA SLLYGIQDPG
GVINVVSKRP QLQQYNALTV RGSTYGSGKN GSGGGLDSTG ALGDSNFAYR LVVDHEDEDY
WRNYGVHRES LVAPSLAWLG EDTQVVLAYE HREFLYPFDR GTAFGNNGHP LNIPATRRLD
EPFNDMEGRS DLYRLEVDHQ LADDWKLHFG YSFNRETYDA SQVRVTGVNE TQGTLTRSID
GTHNAMSRDQ FVTLSLNGNV ELAGMQHDLL FGIDHEDRKI FRGDLIRQTP QSTFSYLDPV
YGQEVEGTNV RASDSDQTDK LRTDALFVQD ALHLNEHWIL VAGARFQQYD QYAGRGRPFK
ANTDISGQAW VPHAGIVYKV DDQLSFYGSY SESFKPNSTI APLTGNVVLD ASVAPEEGKS
WELGAKLDMP GRITGTLALF DITKRNVLVS NFDAVTSETV YSNAGEVSSR GVELDVTGQI
SERWSLIGSY ALTDAKVTKD PDLEGNRLQN VARHSGSLSA VYDFGSLFGG DRLRFGAGAR
YVGERSGNAT NTFDLPSYTV ADAFATYETK LDEHNVRLQL NVKNLFDKVY YSSAVNQYFV
AIGDARQVSL SSTFEF
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