| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4430 |
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| Symbol | |
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| ID | 5192033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4950358 |
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| End bp | 4951800 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588905 |
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| Product | ATP-dependent RNA helicase RhlB |
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| Protein accession | YP_001269734 |
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| Protein GI | 148549632 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.649102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCAAAG CACTCAGAAA AATATTCGGC AAGGGAGAGG CCGCGCCACA AGCCGCCGCT
CCTGCTGCCA GCGTGACGCC GGAAGCCCGG CCCGCGGCAA AACCGGCCGC ACCCCATGCC
AACCCCGCCC CCAAGGCTGA GCAACCTGCC GCCGCGACGC CACCTGCCGA TCAACCGGCC
AAGGACAAAC CGCGCCGCGA ACGCAAGCCC AAGCCACAGG CCAGCCTGTG GAAGCCCGAA
GACTTCGTGG TCGAGCCACA GGAAGGCAAA ACCCGCTTCC ACGACTTCAA GCTGTCCAAC
GAGCTGATGC ACGCCATCCA CGACCTGGGC TTCCCGTACT GCACGCCAAT CCAGGCGCAG
GTCCTGGGTT ACACCCTGCG TGGCCAGGAC GCCATCGGCC GGGCCCAGAC GGGCACCGGC
AAGACGGCCG CCTTCCTGAT CTCGATCATT TCCCAGTTGC AGCAGACGCC ACCGCCTAAA
GAGCGCTACA TGGGCGAGCC GCGCGCGCTG ATCATCGCCC CCACCCGCGA GCTGGTGGTG
CAGATCGCCA AGGACGCCGC TGCCCTGACC AAGTACACCG GCCTGAACGT GATGAGCTTC
GTCGGTGGCA TGGACTTCGA CAAGCAGCTC AAAGCCCTGG AAGCGCGCCA CTGCGATATC
CTGGTGGCCA CCCCGGGCCG CCTGCTGGAC TTCAACCAGC GTGGCGAAGT GCACCTGGAC
ATGGTCGAGG TGATGGTGCT TGACGAAGCC GACCGCATGC TCGACATGGG CTTCATCCCC
CAGGTCCGCC AAATCATTCG TCAGACACCG CCGAAAAGCG AGCGCCAGAC CCTGCTGTTC
TCCGCCACCT TCACCGACGA TGTGATGAAC CTGGCCAAGC AGTGGACCAC CAACCCTGCC
ATCGTCGAGA TCGAGCCGGA GAACGTGGCC AGCGAAACGG TGGAGCAGCA CGTGTATGCG
GTGGCCGGCA GCGACAAGTA CAAACTGCTG TACAACCTGG TAACCCAGAA CAAGTGGGAA
CGGGTGATGG TGTTCGCCAA CCGCAAGGAC GAAGTGCGGC GCATCGAGGA AAAGCTGGTA
CGCGACGGTA TCAATGCCGC CCAGCTGTCG GGCGACGTGC CGCAGCACAA GCGCATCCGA
ACCCTGGAGA GCTTCCGCGA AGGGCGCATC ACCGTGCTGG TGGCCACCGA CGTGGCCGGG
CGCGGGATCC ATATCGATGG CATCAGCCAC GTGATCAACT TCACCCTGCC GGAAGACCCT
GACGACTACG TGCACCGCAT TGGCCGTACC GGCCGTGCCG GCACCAGTGG TGTGTCGATC
AGCTTTGCCG GTGAAGATGA CTCGTATCAG CTGCCAGCGA TCGAAGCGCT GCTGGGGCGC
AAGATCAAGT GCGAGATGCC GCCGGATGAA CTGCTCAAGC CGGTGCCGCG CAAGCATCAC
TGA
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| Protein sequence | MLKALRKIFG KGEAAPQAAA PAASVTPEAR PAAKPAAPHA NPAPKAEQPA AATPPADQPA
KDKPRRERKP KPQASLWKPE DFVVEPQEGK TRFHDFKLSN ELMHAIHDLG FPYCTPIQAQ
VLGYTLRGQD AIGRAQTGTG KTAAFLISII SQLQQTPPPK ERYMGEPRAL IIAPTRELVV
QIAKDAAALT KYTGLNVMSF VGGMDFDKQL KALEARHCDI LVATPGRLLD FNQRGEVHLD
MVEVMVLDEA DRMLDMGFIP QVRQIIRQTP PKSERQTLLF SATFTDDVMN LAKQWTTNPA
IVEIEPENVA SETVEQHVYA VAGSDKYKLL YNLVTQNKWE RVMVFANRKD EVRRIEEKLV
RDGINAAQLS GDVPQHKRIR TLESFREGRI TVLVATDVAG RGIHIDGISH VINFTLPEDP
DDYVHRIGRT GRAGTSGVSI SFAGEDDSYQ LPAIEALLGR KIKCEMPPDE LLKPVPRKHH
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