Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4424 |
Symbol | |
ID | 5190273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4943779 |
End bp | 4944939 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640588899 |
Product | 2-alkenal reductase |
Protein accession | YP_001269728 |
Protein GI | 148549626 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family [TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.377382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAGG CTTTGCGTTA CTTCGGCTGG CCCCTGCTTA CCGGCATACT GATCGCCATG CTGATCATCC AGCGTTTTCC GCAATGGGTC GGGCTGCCCA GCCAGGACGT CAACCTGCAG CAAGCGCCAC AGACCACGCG GATCATGCAA GGCCCGGTGT CGTACGCCGA CGCCGTGACC CTGGCCGCCC CGGCGGTGGC CAACCTGTAC ACCACCAAGG TGGTGAACAA AAGCGCCCAC CCGCTGTTCG AAGACCCGCA GTTCCGCCGC TTCTTCGGCG ATAACCTGCC CAAACAGCGC CGCTGGGAAT CAAGCCTGGG TTCGGCGGTA ATCATGAGCC CAGAGGGCTA CCTGCTGACC AACAACCATG TCACCAGCGG CGCCGACCAG ATCGTCGTAG CGCTGAAGGA TGGCCGCGAA ACCCTGGCCC GCGTGATCGG CAGCGATCCG GAAACCGACC TGGCGGTGCT GAAGATCGAC TTGAAGAACC TGCCGGCGAT CACCATCGGC CGTTCCGACA CCATTCACAT CGGCGACGTG TCGCTGGCCA TCGGCAACCC GTTCGGCGTC GGCCAGACGG TGACCATGGG CATCATCAGC GCCACTGGCC GCAACCAGCT GGGGCTGAAC AACTACGAAG ACTTCATCCA GACCGACGCG GCGATCAACC CGGGCAACTC CGGTGGCGCG CTGGTGGATG CCAATGGCAA CCTGATCGGC ATCAATACCG CGATCTTTTC CAAGTCCGGT GGCTCGCAGG GCATCGGCTT CGCCATCCCG GTAAAACTGG CACTGGAGGT GATGAAGTCG ATCGTCGAAC ACGGCCAGGT GATCCGTGGC TGGCTGGGTA TCGAAGTACA GCCGCTGAGC CAGGAGCTGG CAGAGTCGTT CGGCATGAAG GACCGCCCAG GCATCGTGGT GGCGGGTATC TTCCGCGAGG GGCCAGCGGC CAAGGCCGGG CTGCAACTGG GTGACGTGAT CCTGAGCATC AATGGCGAGC CGGCCGGCGA CGGGCGCAAG TCGATGAACC AGGTTGCGCG GATCAAACCC AACGAGAAGA TCACCATCGA GGTGATGCGC AACGGTCAGC AATTGAAGCT GATCGCCGAG GTGGGGCTGC GGCCGCCGCC GGCGCCGGCT GTAACGCAAG AAGAAAAGTA A
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Protein sequence | MFKALRYFGW PLLTGILIAM LIIQRFPQWV GLPSQDVNLQ QAPQTTRIMQ GPVSYADAVT LAAPAVANLY TTKVVNKSAH PLFEDPQFRR FFGDNLPKQR RWESSLGSAV IMSPEGYLLT NNHVTSGADQ IVVALKDGRE TLARVIGSDP ETDLAVLKID LKNLPAITIG RSDTIHIGDV SLAIGNPFGV GQTVTMGIIS ATGRNQLGLN NYEDFIQTDA AINPGNSGGA LVDANGNLIG INTAIFSKSG GSQGIGFAIP VKLALEVMKS IVEHGQVIRG WLGIEVQPLS QELAESFGMK DRPGIVVAGI FREGPAAKAG LQLGDVILSI NGEPAGDGRK SMNQVARIKP NEKITIEVMR NGQQLKLIAE VGLRPPPAPA VTQEEK
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