Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4386 |
Symbol | murC |
ID | 5195139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4906120 |
End bp | 4907568 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640588863 |
Product | UDP-N-acetylmuramate--L-alanine ligase |
Protein accession | YP_001269693 |
Protein GI | 148549591 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0804649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.186953 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGAGA GCCAGAAAGC CATGCCCCAG CCGAAGATGG GCCGTATTCG CCGCATTCAC TTCGTCGGCA TCGGCGGCGT GGGCATGTGC GGTATTGCCG AAGTGTTGCT GAACCTGGGC TATGAAGTGT CCGGTTCGGA CCTTAAAGCC TCGCCGGTGA CCGAGCGCCT GGAGTCCTTT GGCGCTGAGA TCTTCGTCGG CCACCGCGCC GAGAACGCTG CCACCGCCGA TGTGTTGGTG GTGTCCAGCG CCATCAACCC GGCCAACCCG GAAGTTGCCA CCGCACTGGA GCGGCGCATT CCGGTGGTGC CGCGTGCCGA GATGCTCGCC GAGCTGATGC GTTACCGCCA TGGCGTGGCC GTTGCCGGTA CTCACGGCAA GACCACCACG ACCAGCCTGC TGGCTTCAGT GTTCGCCGCC GGTGGCCTGG ACCCAACCTT CGTTATCGGT GGCCGTCTTA CCGCTGCCGG TACCAATGCG CAGCTGGGCA CCAGCCGCTA CCTGATCGCT GAAGCAGACG AAAGCGATGC CAGCTTCCTG CACCTGCAGC CGATGGTCGC GGTTGTCACC AACATCGACG CCGACCACAT GGCGACCTAC GAAGGTGACT TCAACAAGCT GAAGAAAACC TTCGTCGAGT TCCTGCACAA CCTGCCGTTC TATGGGCTGG CGGTGATGTG CCTGGACGAC CCGGTGGTTC GCGAGATCCT GCCGCAGGTG AAGCGCCCGA CCGTGACCTA CGGCTTCAGC GAAGAGGCCG ACATCCGCGC CATCAATGTG CGTCAGCAGG GCATGCAGAC CCACTTCACC GTGCTGCGCC GTGATCGCGA GCCGTTGGAG GTTTCGGTGA ACATGCCCGG CAACCACAAC GTGCTCAACG CCCTGGCGAC CATCGCCATC GCCACTGACG AAGGCATTAC TGACGAGGCC ATCGTCCAGG GCCTGTCCGG CTTCCAGGGT GTCGGTCGTC GCTTCCAGGT ATACGGCGAG CTGCCGGTCG AAGGCGGCAG TGTGATGCTG GTTGACGACT ACGGTCATCA CCCCACCGAA GTGGCGGCGG TGATCAAGGC TGTGCGCGGT GGCTGGCCAA GCCGCCGCCT GGTGATCGTC TACCAGCCGC ACCGCTACAG CCGCACCCGC GACCTGTACG ACGATTTCGT CCAGGTGCTG GGCGATGCCA ACGTGCTGCT GCTGATGGAG GTCTACCCGG CCGGCGAAGA GCCGATCCCC GGTGCCGACA GCCGTCAGCT GTGCCACAGC ATCCGCCAGC GCGGCAAGCT GGACCCGATC TACATCGAGC GCGGCGTCGA GCTGGCACCG CTGGTCAAGC CACTGCTGCG CGCTGGCGAC ATTTTGATCT GTCAGGGTGC CGGTGATGTC GGCGGCCTGG CCCCGCAGTT GATGAAAAGC CCGCTGTTCG CAGGCGCCAA GCAGGAGAAG TCGAAATGA
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Protein sequence | MVESQKAMPQ PKMGRIRRIH FVGIGGVGMC GIAEVLLNLG YEVSGSDLKA SPVTERLESF GAEIFVGHRA ENAATADVLV VSSAINPANP EVATALERRI PVVPRAEMLA ELMRYRHGVA VAGTHGKTTT TSLLASVFAA GGLDPTFVIG GRLTAAGTNA QLGTSRYLIA EADESDASFL HLQPMVAVVT NIDADHMATY EGDFNKLKKT FVEFLHNLPF YGLAVMCLDD PVVREILPQV KRPTVTYGFS EEADIRAINV RQQGMQTHFT VLRRDREPLE VSVNMPGNHN VLNALATIAI ATDEGITDEA IVQGLSGFQG VGRRFQVYGE LPVEGGSVML VDDYGHHPTE VAAVIKAVRG GWPSRRLVIV YQPHRYSRTR DLYDDFVQVL GDANVLLLME VYPAGEEPIP GADSRQLCHS IRQRGKLDPI YIERGVELAP LVKPLLRAGD ILICQGAGDV GGLAPQLMKS PLFAGAKQEK SK
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