Gene Pput_4378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4378 
SymbolargJ 
ID5190564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4895728 
End bp4896945 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content64% 
IMG OID640588855 
Productbifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 
Protein accessionYP_001269685 
Protein GI148549583 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1364] N-acetylglutamate synthase (N-acetylornithine aminotransferase) 
TIGRFAM ID[TIGR00120] glutamate N-acetyltransferase/amino-acid acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.188174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0195199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTTG GTCTTGGTCC TTTGCCCACC CTGCACCCGG TTCCGGGTTT TGAACTCGGT 
ATCGCTTCTG CCGGTATCAA GCGCCCGGGG CGCAAGGATG TGGTGGTCAT GCGCTGTGCC
GAAGGCTCCA GCGTGGCTGG CGTGTTCACC CTCAACGCCT TCTGCGCAGC GCCGGTGATC
CTGTCCAAGC AGCGTGTACA GGGCACCGTG CGCTACCTGC TGACCAACAC GGGTAACGCC
AACGCCGGCA CCGGCGCGCC AGGCCTGGCC GCCGCCGAGC GCACCTGCGC CAAGCTGGCC
GAACTGGCTG GCGTACCGGC CGAGTCGGTA CTGCCGTTCT CCACCGGCGT GATTGGCGAG
CCGCTGCCGG TCGAAAAGAT CGAAGGCGCG CTGCAGGCCG CCCTCGACAA CCTGTCGGAG
AACAACTGGG CTGAGGCCGC TACCGGCATC ATGACCACCG ACACCCTGCC CAAAGGGGCC
AGCCGCCAGT TCCAGCACGA TGGCGTGACC GTTACCGTCA CCGGTATCAG CAAGGGTGCA
GGCATGATCC GCCCGAACAT GGCGACCATG CTGGGCTACA TCGCCACCGA CGCCAAGGTG
GCACCAAGCG TCCTCAAGGA CCTGATGTTG GACGGCGCCA ACAAGTCGTT CAACCGCATC
ACGATCGATG GTGACACTTC GACCAACGAT TGCTGCATGC TGATCGCTAC CGGCAAGGCC
GACCTGCCGG AAGTGACTGA AGCCAGCGGC GCGCTCTTCG AAGCGCTGAA AAAGGCCGTG
TTCGAAGTGT GCATGGAAGT GGCCCAGGCC ATCGTCCGTG ACGGCGAAGG CGCGACCAAG
TTCGTGACCG TGCAAGTCAA CGGTGGTGGT AACCACCAGG AGTGTCTGGA CGTCGGCTAC
GCCGTGGCCC ACTCGCCGCT GATCAAGACC GCGCTGTTCG CTTCCGACCC GAACTGGGGC
CGTATCCTCG CTGCCGTAGG CCGTGCCGGT GTACCGGAGC TGGATGTGAG CCTGATCGAT
GTTTACCTGG ACAGCGTTTG CATTGCGAGC AAAGGCGGCC GCAGCCCGAG CTATACCGAA
GCGCAGGGTT CGGCAGTGAT GGCCCAGGAA GAGATCACCA TCCGAATCGA ACTGGGCCGT
GGCCAGTGCA GCGAAACCAT CTGGACGACC GACCTGTCCC ACGAGTACGT GAAGATCAAC
GCCGAGTACC GTACCTGA
 
Protein sequence
MAVGLGPLPT LHPVPGFELG IASAGIKRPG RKDVVVMRCA EGSSVAGVFT LNAFCAAPVI 
LSKQRVQGTV RYLLTNTGNA NAGTGAPGLA AAERTCAKLA ELAGVPAESV LPFSTGVIGE
PLPVEKIEGA LQAALDNLSE NNWAEAATGI MTTDTLPKGA SRQFQHDGVT VTVTGISKGA
GMIRPNMATM LGYIATDAKV APSVLKDLML DGANKSFNRI TIDGDTSTND CCMLIATGKA
DLPEVTEASG ALFEALKKAV FEVCMEVAQA IVRDGEGATK FVTVQVNGGG NHQECLDVGY
AVAHSPLIKT ALFASDPNWG RILAAVGRAG VPELDVSLID VYLDSVCIAS KGGRSPSYTE
AQGSAVMAQE EITIRIELGR GQCSETIWTT DLSHEYVKIN AEYRT