Gene Pput_4343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4343 
Symbol 
ID5194080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4857683 
End bp4858474 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content63% 
IMG OID640588820 
Product3-oxoadipate enol-lactonase 
Protein accessionYP_001269650 
Protein GI148549548 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR02427] 3-oxoadipate enol-lactonase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.149189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0581646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCACT TGCAACTGGC CGATGGCGTT TTGAATTACC AGATCGATGG CCCGGATGAC 
GCCCCGGTGC TGGTCCTGTC CAACTCGCTG GGTACCGACC TGGGCATGTG GGACACCCAG
ATTCCGCTCT GGAGCCAGCA CTTCCGGGTG CTGCGCTATG ACACCCGTGG TCACGGCGCA
TCGCTGGTCA CAGAAGGCCC TTACAGCATC GAACAGCTGG GCCGCGACGT GCTGGCCCTG
CTCGATGGCC TGGACATTCA AAAGGCTCAC TTCGTCGGCC TGTCGATGGG AGGCCTGATC
GGCCAGTGGC TGGGTATTCA TGCAGGTGAG CGCCTGCACA GCCTGACCCT GTGCAACACG
GCCGCCAAGA TCGCCAACGA CGAGGTGTGG AACACCCGTA TCGACACGGT ACTCAAAGGC
GGCCAGCAGG CCATGGTCGA CCTGCGCGAT GCCTCTATCG CCCGCTGGTT CACCCCGGGC
TTTGCCCAGG CACAGGCGGA GCAGGCCCAG CGTCTCTGCC AGATGCTGGC GCAAACCAGC
CCGCAAGGCT ACGCAGGCAA CTGTGCAGCA GTACGTGACG CTGATTATCG TGAGCAACTG
GGCCGCATCC AGGTGCCCGC GCTGATCGTT GCCGGTACGG AAGACGTGGT TACCACCCCT
GAGCATGGCC GCTTCATGCA GGCCGGTATC CAAGGTGCCG AGTACGTCGA CTTCCCGGCG
GCGCACCTGT CCAATGTCGA GATTGGCGAG GCCTTCAGCC GCCGCGTGCT CGATTTTCTG
CTGGCTCACT GA
 
Protein sequence
MAHLQLADGV LNYQIDGPDD APVLVLSNSL GTDLGMWDTQ IPLWSQHFRV LRYDTRGHGA 
SLVTEGPYSI EQLGRDVLAL LDGLDIQKAH FVGLSMGGLI GQWLGIHAGE RLHSLTLCNT
AAKIANDEVW NTRIDTVLKG GQQAMVDLRD ASIARWFTPG FAQAQAEQAQ RLCQMLAQTS
PQGYAGNCAA VRDADYREQL GRIQVPALIV AGTEDVVTTP EHGRFMQAGI QGAEYVDFPA
AHLSNVEIGE AFSRRVLDFL LAH