Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4343 |
Symbol | |
ID | 5194080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4857683 |
End bp | 4858474 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640588820 |
Product | 3-oxoadipate enol-lactonase |
Protein accession | YP_001269650 |
Protein GI | 148549548 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR02427] 3-oxoadipate enol-lactonase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.149189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0581646 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCACT TGCAACTGGC CGATGGCGTT TTGAATTACC AGATCGATGG CCCGGATGAC GCCCCGGTGC TGGTCCTGTC CAACTCGCTG GGTACCGACC TGGGCATGTG GGACACCCAG ATTCCGCTCT GGAGCCAGCA CTTCCGGGTG CTGCGCTATG ACACCCGTGG TCACGGCGCA TCGCTGGTCA CAGAAGGCCC TTACAGCATC GAACAGCTGG GCCGCGACGT GCTGGCCCTG CTCGATGGCC TGGACATTCA AAAGGCTCAC TTCGTCGGCC TGTCGATGGG AGGCCTGATC GGCCAGTGGC TGGGTATTCA TGCAGGTGAG CGCCTGCACA GCCTGACCCT GTGCAACACG GCCGCCAAGA TCGCCAACGA CGAGGTGTGG AACACCCGTA TCGACACGGT ACTCAAAGGC GGCCAGCAGG CCATGGTCGA CCTGCGCGAT GCCTCTATCG CCCGCTGGTT CACCCCGGGC TTTGCCCAGG CACAGGCGGA GCAGGCCCAG CGTCTCTGCC AGATGCTGGC GCAAACCAGC CCGCAAGGCT ACGCAGGCAA CTGTGCAGCA GTACGTGACG CTGATTATCG TGAGCAACTG GGCCGCATCC AGGTGCCCGC GCTGATCGTT GCCGGTACGG AAGACGTGGT TACCACCCCT GAGCATGGCC GCTTCATGCA GGCCGGTATC CAAGGTGCCG AGTACGTCGA CTTCCCGGCG GCGCACCTGT CCAATGTCGA GATTGGCGAG GCCTTCAGCC GCCGCGTGCT CGATTTTCTG CTGGCTCACT GA
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Protein sequence | MAHLQLADGV LNYQIDGPDD APVLVLSNSL GTDLGMWDTQ IPLWSQHFRV LRYDTRGHGA SLVTEGPYSI EQLGRDVLAL LDGLDIQKAH FVGLSMGGLI GQWLGIHAGE RLHSLTLCNT AAKIANDEVW NTRIDTVLKG GQQAMVDLRD ASIARWFTPG FAQAQAEQAQ RLCQMLAQTS PQGYAGNCAA VRDADYREQL GRIQVPALIV AGTEDVVTTP EHGRFMQAGI QGAEYVDFPA AHLSNVEIGE AFSRRVLDFL LAH
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