| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4317 |
|---|
| Symbol | |
|---|
| ID | 5192761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 4827268 |
|---|
| End bp | 4828278 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640588794 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001269624 |
|---|
| Protein GI | 148549522 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00276005 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCAC TTGATGCCAC CCTTACCCCC TGGCCAGAAC TCGCCGCCCG CCACCCCTGC
GACGCCCTGC TGCTGGGCAA TGGCGCAAGC CGCGCAGTAT GGAAGCCGTT CGGCTACTTC
TCGCTGTTCG AGCAAGCGCA ACGCGCAGGC CGCAAGAAAG GCCTGGCGGT CAGTGACCAG
GCACTGTTCA AGTCCTTGGG CACGGAACTG TTCGAGCCGG TGCTCAGCGC CCTCAACACC
ACCGTGCGTA CCAATGCCGC ACTGGCCATC AACTCCACCG CGCCGCTGAA CCGCTACTAC
TCGATCAAGG AAGCGTTGAT TCACGCCGTG CGCACGGTGC ATCTGCCCTG GCCGCTGATG
CCACCGGCCA CCCTGGCAAC CCTCAATCAG GCCCTGCGCG GCTATCGAAG CGTCTACACC
AGCAACTACG ACCTGTTGCT GCCATGGGCC GTGCAGCACG CCCCGAATGG CTTCGCCGAA
CTGTTCGACG AACAAGGCTA TTTCGACGTG CGACGCACCG GCAGCGAAGG TACCCGGGTG
CTGCACCTGC ATGGCGGCCT GCACCTGCTC AAGCTGCCCG ACGGCACCAC CCGCCAGCGC
AGCGCTGAAA GCGCCGAACT GCTCGATGGG TTTGCCGTGA ATATCCCGGG TGAAGTACCG
CTGTTCGTCA ACGAAGACCG CAGCGACGAG AAACTGCGCG CTATCCGCAA CTCGGACTAT
CTGAGCTGGT GCCTGGGGCA GCTGGCGCAG GAAAACCAAG GGATATGCCT GTTCGGGCAG
CATCTGGACA GCAGTGACCG GCACCTGCTC GACGCTGTGC GCCAAGCCCG TCCGCAACAG
CTATCCATTG CCATTCGGCC GCTGGGCGAG GCGTCGGTGA TCAATCAGAA GCAGCATTTT
GCAGATCGTT TCGGGGATTT GCCGGGGACG GCGCTGCATT TCTTCGATGC CAGCACCCAT
CCGTTGGGGC AGGCAGCATT GGCTATCGAA GTGCCCTCTG CTCAGCGCTG A
|
|---|
| Protein sequence | MPALDATLTP WPELAARHPC DALLLGNGAS RAVWKPFGYF SLFEQAQRAG RKKGLAVSDQ
ALFKSLGTEL FEPVLSALNT TVRTNAALAI NSTAPLNRYY SIKEALIHAV RTVHLPWPLM
PPATLATLNQ ALRGYRSVYT SNYDLLLPWA VQHAPNGFAE LFDEQGYFDV RRTGSEGTRV
LHLHGGLHLL KLPDGTTRQR SAESAELLDG FAVNIPGEVP LFVNEDRSDE KLRAIRNSDY
LSWCLGQLAQ ENQGICLFGQ HLDSSDRHLL DAVRQARPQQ LSIAIRPLGE ASVINQKQHF
ADRFGDLPGT ALHFFDASTH PLGQAALAIE VPSAQR
|
|---|
| |