Gene Pput_4302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4302 
Symbol 
ID5193423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4811377 
End bp4812666 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content64% 
IMG OID640588779 
Productouter membrane porin 
Protein accessionYP_001269610 
Protein GI148549508 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.188975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCAT TGCAGCCGCA GGCGTTCGCG CCTACCCGTT CCTTTGCCGC ACGCCCCTCA 
GCCATCGCCA GCGCCCTCGC GCTTGCCGGT GTCGCCCCGA TGAGCCAGGC CGCCTTCTTC
GAAGACAGCA CGGCCACCTT CGAAACCCGC AACATGTACT TCAACCGCGA CTTCCGCGAC
GGCACCAGCG CGCAGCAATC CAAGCGCGAT GAATGGGCCC AGGGCTTCAT CCTCAATTTC
GAGTCTGGCT ACACCGATGG CACCGTGGGC TTTGGCCTGG ACGCATTGGG CATGCTCGGC
ATCAAGCTCG ACTCCAGCCC CGACCGTACC GACAGCGGCC TGCTGCCGAC CCACGATGAC
GGCAAGGCTG CCGACGAATA CTCCAAGCTG GGCCTGACCG GCAAGGTGAA GATCTCCCAG
ACTGAACTCA AGATCGGCAC CCTGATTCCC GAGCTGCCGA CCCTGCAGCC CAACGACGGG
CGTATCCTGC CGCAAACCTT CGAGGGCGGC CTGCTCACCT CCAAAGAGAT CAAGGGCCTG
ACCTTCACCG GTGGCCGCCT GGACAAGGCC AAGGACCGCA ACGACACCAA CTGGGAAGAC
CTGGCGCTGA ACAACAAGAA CGGCCGCTTC GGTGGCAGCT TCAGCGCTGA CAACCTGGCC
CTGGGCGGGC TCGACTACCA GTTCACCGAC CGCATCACCG GCAGCTACCA CTTCGCCCAG
CTCGACGATA TTTACCGCCA GCACTTCATC GGCATGGTCG CCACCCAGCC ATGGGGCCCG
GGCACCTTGG GTGCCGACCT GCGCCTTGCC ATCAGCGACG ACGCCGGTGC AGCCAAGGCC
GGCAACATCG ACAACACCAC CGTCAACGGC ATGCTCAGCT ATGCCCTGGG CGGGCACAAG
GTCAGCGCCG CCTGGCAGCA GCTGTCTGGC GAAAGTGCCT TCCCGTATGT GGATGGCGCC
GACCCGTACC TGGTCAACTT CGTCCAGATC AACGACTTCG CCGGTGCCGA CGAACGCTCC
TGGCAGGCGC GCTACGACTA CAACTTCGCC GCGCTCGGCG TACCGGGCCT GACCTTCATG
ACCCGTTACA TCAGCGGTGA CAACGTCAGC CGTGCTGCCG GTGGCGAAGG CAAAGAGTGG
GAACGCAACA CCGAACTGAA GTACGTGGTA CAAAGCGGCC CGTTGAAGAA CGTCGCCGTG
CGCCTGCGCA ACGCCACCTT CCGCTCCAAC TTCGCCCGTG ACGCGGATGA AGTGAGGCTG
TTGGTCAGCT ACAGCGTGGC GCTGTGGTAA
 
Protein sequence
MLSLQPQAFA PTRSFAARPS AIASALALAG VAPMSQAAFF EDSTATFETR NMYFNRDFRD 
GTSAQQSKRD EWAQGFILNF ESGYTDGTVG FGLDALGMLG IKLDSSPDRT DSGLLPTHDD
GKAADEYSKL GLTGKVKISQ TELKIGTLIP ELPTLQPNDG RILPQTFEGG LLTSKEIKGL
TFTGGRLDKA KDRNDTNWED LALNNKNGRF GGSFSADNLA LGGLDYQFTD RITGSYHFAQ
LDDIYRQHFI GMVATQPWGP GTLGADLRLA ISDDAGAAKA GNIDNTTVNG MLSYALGGHK
VSAAWQQLSG ESAFPYVDGA DPYLVNFVQI NDFAGADERS WQARYDYNFA ALGVPGLTFM
TRYISGDNVS RAAGGEGKEW ERNTELKYVV QSGPLKNVAV RLRNATFRSN FARDADEVRL
LVSYSVALW