Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4289 |
Symbol | |
ID | 5192891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4797643 |
End bp | 4798497 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640588766 |
Product | signal peptidase I |
Protein accession | YP_001269597 |
Protein GI | 148549495 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTAA ATTTCCCGCT GTTGCTAGTC ATCGCCGTCT TCATCTGCGG TCTGCTGGGC TTGATCGACC TGCTGTTCCT GGCCCCGCGC CGGCGTGCGG CAATCGCCAA CTATCAGGGC AGCGTCAGCC AGCCTGAGAT GGCGGTGGTC GAACGGCTGA ACAAGGAGCC GTTGCTGGTC GAGTACGGCA AGTCGTTCTT CCCGGTGCTG TTCATCGTGC TGGTGCTGCG TTCGTTCCTG GTCGAGCCGT TCCAGATTCC TTCGGGATCG ATGAAACCGA CCCTGGAAGT GGGCGACTTC ATCCTGGTGA ACAAGTTCTC GTACGGCATT CGCCTGCCGG TGATCGACAA GAAGGTCATC GAGATCGGTG ACCCGCAACG CGGGGATGTG ATGGTGTTCC GCTACCCGAG CGACCCGAAT GTCAACTACA TCAAGCGTGT GGTTGGCCTG CCGGGCGACG TAGTCCGCTA CACCAACGAC AAGCGGCTGT TCGTCAACGG CCAGCCCGTT GCCGAACAAC TGGTGGGCAG CGAGCCGGGT ACCTTGGGCA GTGCTCAGCT GTACAAGGAA AAGCTCGGCG CGGCCGAACA CCTGATCCGC AAGGAAATGA GCCGTTATCG CATGCCGCCG GACCAGCAGT GGACCGTGCC TGCAGGCCAT TACTTCATGA TGGGCGACAA CCGCGACAAC TCCAACGATA GCCGTTTCTG GGATGACCCG AACATTCCCA AGGAACTGCA CGGCATGGTT CCGGACCGGA ACATTGTCGG CAAGGCCTTC GCGGTGTGGA TGAGCTGGCC AGAGCCCAAA CTCAGCCACT TGCCCAACCT GTCGCGGGTT GGCCTGATCC ATTGA
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Protein sequence | MSLNFPLLLV IAVFICGLLG LIDLLFLAPR RRAAIANYQG SVSQPEMAVV ERLNKEPLLV EYGKSFFPVL FIVLVLRSFL VEPFQIPSGS MKPTLEVGDF ILVNKFSYGI RLPVIDKKVI EIGDPQRGDV MVFRYPSDPN VNYIKRVVGL PGDVVRYTND KRLFVNGQPV AEQLVGSEPG TLGSAQLYKE KLGAAEHLIR KEMSRYRMPP DQQWTVPAGH YFMMGDNRDN SNDSRFWDDP NIPKELHGMV PDRNIVGKAF AVWMSWPEPK LSHLPNLSRV GLIH
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