| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4288 |
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| Symbol | rnc |
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| ID | 5190265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4796790 |
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| End bp | 4797479 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640588765 |
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| Product | ribonuclease III |
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| Protein accession | YP_001269596 |
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| Protein GI | 148549494 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGCTT CCCTTGCCGG TCTGGAGCGA AAGCTCGGTT ACACCTTCAA GAACCAGGAC
CAGATGCTCC TGGCACTGAC CCATCGCAGT TACGCCGGGC GCAACAATGA GCGCCTGGAG
TTCCTCGGTG ACGCCATTCT CAACTTCGTT GCCGGCGAAG CGCTGTTCGA GCGTTTTCCG
CAGGCTCGCG AAGGCCAGTT GTCGCGGCTG CGTGCGCGGT TGGTCAAGGG GGAGACCCTG
GCCCGTCTGG CCCGTGGTTT TGATCTGGGC GATTACCTGC GCCTGGGTTC CGGAGAACTC
AAGAGCGGCG GCTTTCGCCG CGAGTCGATC CTGGCCGACG CCCTGGAGGC ACTGATTGGT
GCCATCTACC TGGACGCTGA CATGGACACC GCCCGGGAGC GCATTCTGGC CTGGCTGGCC
GATGAGTTTG AAGGCCTGAC ACTGGTCGAC ACCAATAAAG ATCCGAAAAC CCGCCTGCAA
GAGTTCCTGC AGTCGCGCAG CTGTGAGCTG CCGCGTTACG AAGTCGTGGA TATCCAGGGT
GAACCACACT GCCGGACCTT CTTCGTCGAA TGCGAAGTGG TACTGCTGAA CAACAAGAGC
CGTGGTCAAG GCGTTAGCCG GCGTATTGCC GAGCAAGTCG CCGCCGCGTC TGCACTGATC
GCCCTGGGCG TGGAGAATGG CAATGACTGA
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| Protein sequence | MSASLAGLER KLGYTFKNQD QMLLALTHRS YAGRNNERLE FLGDAILNFV AGEALFERFP
QAREGQLSRL RARLVKGETL ARLARGFDLG DYLRLGSGEL KSGGFRRESI LADALEALIG
AIYLDADMDT ARERILAWLA DEFEGLTLVD TNKDPKTRLQ EFLQSRSCEL PRYEVVDIQG
EPHCRTFFVE CEVVLLNNKS RGQGVSRRIA EQVAAASALI ALGVENGND
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