Gene Pput_4287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4287 
Symbolera 
ID5190264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4795895 
End bp4796797 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content60% 
IMG OID640588764 
ProductGTP-binding protein Era 
Protein accessionYP_001269595 
Protein GI148549493 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATA GCAACCCGAC CCGCTGCGGC TACGTAGCCA TTGTTGGCCG TCCCAACGTC 
GGCAAGTCGA CCCTGCTCAA CCACATCCTG GGACAGAAGC TGGCGATTAC TTCGCGAAAG
CCGCAGACCA CCCGCCACAA CATGCTCGGC ATCAAGACCG AAGGTGATGT GCAGGCCATC
TACGTCGATA CCCCCGGTAT GCACAAGGCC AACGACAAGG CCCTGAACCG TTACATGAAC
CGCAATGCCT CGGCGGCCCT CAAGGACGTC GACGTGGTGA TCTTCGTGGT CGACCGTACC
AAGTGGACCG ACGAGGACCA ACTGGTTCTG GAGCGCGTGC AATATGTGAC CGGCCCGCTG
ATCATCGCGG TCAACAAGAC CGACCGTATG GAAGAGAAAG CCGAGCTGAT CCCGCACCTG
CAGTGGCTCC AAGAGCAACT GCCGAACGCC GAGGTGATGC CGATTTCCGC GCAGCAGGGG
CACAATCTCG AGGCGCTGGA GGCACAGATC GCCAAGCACC TGCCCGAGAA CGATCATTTC
TTCCCCGAAG ACCAGATCAC CGACCGTAGC AGCCGCTTCC TGGCCGCCGA ACTGGTGCGC
GAGAAGATCA TGCGCCAGTT GGGTGCGGAG TTGCCGTACC AGATCACCGT GGAGATCGAG
GAATTCAAGC AGCAGGGCCA TGTGCTGCAC ATTCACGCGT TGATCCTGGT TGAACGCGAT
GGCCAGAAGA AAATCATCAT TGGTGACAAG GGTGAGCGCA TCAAGCGCAT CGGTTCCGAG
GCGCGCAAGG ACATGGAAGT GCTATTCGAT TCCAAGGTCA TGCTCAACCT GTGGGTCAAG
GTAAAGGGCG GCTGGTCCGA CGACGAGCGC GCCCTGCGTT CGCTGGGCTA CGGCGACCTG
TAA
 
Protein sequence
MTDSNPTRCG YVAIVGRPNV GKSTLLNHIL GQKLAITSRK PQTTRHNMLG IKTEGDVQAI 
YVDTPGMHKA NDKALNRYMN RNASAALKDV DVVIFVVDRT KWTDEDQLVL ERVQYVTGPL
IIAVNKTDRM EEKAELIPHL QWLQEQLPNA EVMPISAQQG HNLEALEAQI AKHLPENDHF
FPEDQITDRS SRFLAAELVR EKIMRQLGAE LPYQITVEIE EFKQQGHVLH IHALILVERD
GQKKIIIGDK GERIKRIGSE ARKDMEVLFD SKVMLNLWVK VKGGWSDDER ALRSLGYGDL