| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4283 |
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| Symbol | |
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| ID | 5191496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4792079 |
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| End bp | 4792753 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588760 |
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| Product | two component heavy metal response transcriptional regulator |
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| Protein accession | YP_001269591 |
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| Protein GI | 148549489 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0230752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTAC TGATCATTGA GGACGAGCTG CGTACCGCCG ACTACCTGCA ACAGGGCCTT
CGCGAGAACG GTTACGTGGT CGACTGCGCC CACACAGGCA CCGATGGCCT GCACCTGGCA
CGCCAACAGG CCTATGACCT GGTCATTCTC GACGTCAACC TGCCCGAAAT CGATGGCTGG
ACCGTGCTGC AGCGGCTACG TGCCGAATCG GCCACGCGGA TCATGATGCT GACCGCCCAC
GGTCGCTTGG CCGACCGGGT AAAAGGCCTG GACTTGGGCG CGGATGACTA CCTGCTCAAG
CCCTTTGAGT TCCCTGAGCT ACTGGCGCGC ATCCGCAGCC TGCTACGCCG CAACGACCAG
CAACTGCAGC CCAGCACCCT GCGCGTCGCT GACCTGGAAC TGGACCCCGG CCGCCACCGC
GCCTACCGCG CCGGGCAGCG CATCGACCTG ACCGCCAAGG AGTTCGCCCT GCTGCACCTG
CTAATGCGCC AGACTGGCGA AGTGTTGTCG CGCACGCAAA TCATCTCGCT GGTGTGGGAC
ATGAACTTCG ACTGCGACAC CAACGTGGTC GAGGTCTCGA TCCGGCGCCT GCGGGCGAAG
ATCGACGACC CGTTCGACAA CAAGCTGATC CATACCCTGC GTGGTGTGGG CTACGTACTT
GAGGCTCGCC TTTGA
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| Protein sequence | MRLLIIEDEL RTADYLQQGL RENGYVVDCA HTGTDGLHLA RQQAYDLVIL DVNLPEIDGW
TVLQRLRAES ATRIMMLTAH GRLADRVKGL DLGADDYLLK PFEFPELLAR IRSLLRRNDQ
QLQPSTLRVA DLELDPGRHR AYRAGQRIDL TAKEFALLHL LMRQTGEVLS RTQIISLVWD
MNFDCDTNVV EVSIRRLRAK IDDPFDNKLI HTLRGVGYVL EARL
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