Gene Pput_4264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4264 
SymbolpurT 
ID5191984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4767972 
End bp4769153 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content64% 
IMG OID640588741 
Productphosphoribosylglycinamide formyltransferase 2 
Protein accessionYP_001269572 
Protein GI148549470 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) 
TIGRFAM ID[TIGR01142] phosphoribosylglycinamide formyltransferase 2 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTA TCGGAACCCC ATTGTCGCCC ACCGCGACCC GTGTACTGCT CTGCGGCTGT 
GGCGAGCTGG GCAAGGAAGT GGTAATCGAG CTGCAGCGCC TGGGCGTCGA AGTAATCGCC
GTCGACCGTT ACGCCAATGC TCCGGCAATG CAGGTGGCGC ACCGCAGCCA TGTGGTCAAC
ATGCTCGATG GCGTTGCCCT GCGCGCGGTG ATCGAAGCCG AGAAGCCGCA CTACATCGTT
CCGGAAATCG AAGCCATCGC CACCGCCACC CTGGTCGAGC TGGAAAACGA AGGCTTCACC
GTGGTGCCCA CTGCCCGCGC CACCCAGTTG ACCATGAATC GCGAAGGCAT CCGCCGCCTG
GCTGCCGAAG AGCTGGACCT GCCAACCTCG CCGTACCACT TCGCTGACAC CTATGAAGAC
TACGCCAAGG CCGTAGCCGA CCTGGGTTAC CCGTGCGTGG TCAAACCGGT GATGAGCTCG
TCGGGCAAGG GCCAGAGCTT GCTGCGCAGC GATGCTGACC TGCAGGCGTC GTGGGACTAT
GCCCAGGAAG GCGGCCGCGC TGGCAAGGGC CGGGTGATTG TCGAAGGTTT CATCGACTTC
GAATATGAAA TCACCCTGCT GACCGTGCGC CACGTGGGCG GTACCACCTT CCTTGAACCT
GTCGGGCACC GTCAGGAGAA GGGCGATTAC CAAGAGTCCT GGCAGCCACA GGCCATGAGC
CCGAAGGCGC TGGCCGAATC GCAGCGCGTG GCCAAGGCGG TCACCGATGC CCTCGGCGGT
CGCGGCCTGT TTGGTGTGGA GCTGTTCGTG AAGGGCGACC AGGTGTGGTT CAGCGAAGTG
TCGCCGCGCC CGCATGACAC CGGTCTGGTC ACCCTGATTT CCCAGGACCT GTCGCAATTC
GCCCTGCATG CCCGCGCCAT TCTCGGCCTG CCGATTCCGG TGGTGCGTCA GTTCGGCCCG
TCGGCCTCGG CAGTGATCTT GCCCGAAGGC CAGTCCCAAC AGACCAGCTT CGCCAACCTG
GGCGCAGCGC TGAGCGAGCC GGATACCGCC ATTCGCCTGT TCGGCAAGCC GGAAATCAAC
GGTACCCGCC GCATGGGCGT GTGCCTGGCG CGTGACGAAT CGGTCGAACT GGCGCGGGCC
AAGGCGACCC GTGCTTCGCA GGCGGTCAAG GTCGAGTTCT GA
 
Protein sequence
MTRIGTPLSP TATRVLLCGC GELGKEVVIE LQRLGVEVIA VDRYANAPAM QVAHRSHVVN 
MLDGVALRAV IEAEKPHYIV PEIEAIATAT LVELENEGFT VVPTARATQL TMNREGIRRL
AAEELDLPTS PYHFADTYED YAKAVADLGY PCVVKPVMSS SGKGQSLLRS DADLQASWDY
AQEGGRAGKG RVIVEGFIDF EYEITLLTVR HVGGTTFLEP VGHRQEKGDY QESWQPQAMS
PKALAESQRV AKAVTDALGG RGLFGVELFV KGDQVWFSEV SPRPHDTGLV TLISQDLSQF
ALHARAILGL PIPVVRQFGP SASAVILPEG QSQQTSFANL GAALSEPDTA IRLFGKPEIN
GTRRMGVCLA RDESVELARA KATRASQAVK VEF