Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4261 |
Symbol | |
ID | 5193596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4764194 |
End bp | 4765045 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640588738 |
Product | cytochrome c assembly protein |
Protein accession | YP_001269569 |
Protein GI | 148549467 |
COG category | [R] General function prediction only |
COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.99902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAACT CCGTCTCTTT AAAGGCTCGC CAACCAGGAC TTATGGTCTC CTCTCCCAGC CTCATTCCCA ACCTGATCGC CGCCGGCCTA TATATAGCAG CGGCCATCTA CCAGGGCTCT CACCTGGCCC AGGGCCGCAA GGCCGACAAG CGCCTGCTTG GCCTGCTGGG TGCCTTCGCG GTGCTGGCCC AGGCCGGCGC ACTGTTCTTC CAGCTGATCA CCCCGCTGGG GCTGAGCCTG GACTTCTTCA GCGCCGCCAG CCTAATCGCC GTGGCAGTCA TTACCCTGAC ATTGCTGGCC TGCCTGCGCA TACCGGTAGA AAACCTGCTG GTGCTGCTGT TCCCGCTGGG CGCGGTAACG GCACTGCTGG CGCAGTTCGC GCCCCCCGGT ACGGTGCCGC TGATCAATGA GGAACCAGGC ATCCTTGCGC ATATCCTGTT GTCGATCCTG GCCTACGGGC TGTTCACCAT CGCGGTGTTC CAGTCGCTGC TGTTGCTGCT GCAGGACCGC CAGCTGAAGA ACAAGCACCC GTCCGGGCTG ATCCGCAACT TCCCGCCACT GCAGACCATG GAAAGCCTAC TGTTCGGCTT CCTCTGGGCC GGTTGGTGCC TGCTGTCGCT GTCGCTGATC TCCGGCTGGC TGTTCCTCGA CAACCTGTTT GCCCAGCACC TGGCGCACAA GACCTTGCTG GCCTGTGTCG CCTGGGTGGT GTTCAGCGTG CTGCTGTGGG GACGCACCCG CCTGGGTTGG CGGGGCCACA TGGCCATCCG CTGGACGCTG GCCGGTTTCT GCCTGCTGAT GCTGGCCTAT TTCGGCAGCA AGCTGGTTCG CGAATTCATC TTGCATATCT GA
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Protein sequence | MPNSVSLKAR QPGLMVSSPS LIPNLIAAGL YIAAAIYQGS HLAQGRKADK RLLGLLGAFA VLAQAGALFF QLITPLGLSL DFFSAASLIA VAVITLTLLA CLRIPVENLL VLLFPLGAVT ALLAQFAPPG TVPLINEEPG ILAHILLSIL AYGLFTIAVF QSLLLLLQDR QLKNKHPSGL IRNFPPLQTM ESLLFGFLWA GWCLLSLSLI SGWLFLDNLF AQHLAHKTLL ACVAWVVFSV LLWGRTRLGW RGHMAIRWTL AGFCLLMLAY FGSKLVREFI LHI
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