Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4260 |
Symbol | |
ID | 5192666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4762547 |
End bp | 4763923 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640588737 |
Product | signal recognition particle protein |
Protein accession | YP_001269568 |
Protein GI | 148549466 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGAAA ACCTGACCGA CCGCCTGTCA CAGACGCTGC GCCATGTCAC CGGCAAGGCC AAGCTGACCG AAGACAACAT CAAGGACACG CTGCGCGAAG TGCGCATGGC GCTGCTCGAG GCCGACGTTG CCCTGCCGGT CGTCAAGGAT TTCGTCAACA GCGTCAAGGA TCGTGCGGTC GGGACCGAGG TGTCGCGCAG CCTGACCCCG GGCCAGGCTT TCGTGAAGAT CGTCCAGGCC GAGCTGGAAA GCCTGATGGG CGCGGCCAAC GAAGACCTCG CCCTGAACGC CGCCCCGCCT GCTGTCGTGC TGATGGCGGG CCTGCAGGGC GCCGGTAAGA CCACCACTGC CGGCAAGCTG GCGCGCTTTC TTAAAGAGCG CAAGAAAAAG AGCGTGATGG TGGTGTCTGC CGACGTCTAT CGTCCGGCGG CGATCAAGCA GTTGGAAACA CTGGCCAACG ATATCGGCGT CACCTTCTTC CCGTCCGATA TCAGCCAGAA GCCGGTGGCC ATCGCCGAAG CCGCCATCCG TGAAGCCAAG CTGAAGTTCA TCGACGTGGT CATCGTCGAC ACCGCGGGCC GTCTGCACAT CGACGCCGAC ATGATGGACG AGATCAAGGC GCTGCACGCT GCCGTCAAAC CGATCGAGAC GCTGTTCGTG GTCGACGCCA TGACCGGCCA GGACGCTGCC AACACCGCCA AGGCCTTTGG CGAGGCGCTG CCGCTGACCG GTGTGGTGCT GACCAAGGTC GACGGTGACG CCCGTGGCGG TGCTGCGCTG TCGGTACGTG CAATCACCGG CAAACCGATC AAGTTCATCG GTATGGGTGA GAAGACCGAG GCCCTCGAGC CGTTCCACCC CGACCGCGTC GCTTCGCGCA TCCTCGGCAT GGGCGACGTG CTCAGTCTGA TCGAGCAGGC TGAGCAGACC ATCGACAAGG CCAAGGCCGA CAAGCTGGCC AAGAAGCTGA AGAAAGGCAA GGGCTTCGAC CTCGAAGACT TCCGTGACCA GCTGCAGCAA ATGAAGAACA TGGGCGGCCT CGGCGGCCTG ATGGACAAGC TGCCAAGCAT CGGCGGGGTC AACCTGTCAC AAATGGGCAA CGCCCAGGGC GCGGCCGAAA AGCAGTTCAA GCAGATGGAA GCGATCATCA ACTCCATGAC CCCGGCCGAG CGCCGCGACC CTGACCTGAT CAGCGGTTCG CGCAAGCGCC GTATTGCGTT GGGTTCCGGT ACCCAGGTGC AGGACATCGG TCGGCTGATC AAGCAGCACA AGCAGATGCA GAAGATGATG AAGAAGTTTT CTGCCAAAGG CGGCATGGCC AAGATGATGC GCGGCCTCGG TGGGATGCTG CCAGGTGGCG GCATGCCAAA GCTGTAA
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Protein sequence | MFENLTDRLS QTLRHVTGKA KLTEDNIKDT LREVRMALLE ADVALPVVKD FVNSVKDRAV GTEVSRSLTP GQAFVKIVQA ELESLMGAAN EDLALNAAPP AVVLMAGLQG AGKTTTAGKL ARFLKERKKK SVMVVSADVY RPAAIKQLET LANDIGVTFF PSDISQKPVA IAEAAIREAK LKFIDVVIVD TAGRLHIDAD MMDEIKALHA AVKPIETLFV VDAMTGQDAA NTAKAFGEAL PLTGVVLTKV DGDARGGAAL SVRAITGKPI KFIGMGEKTE ALEPFHPDRV ASRILGMGDV LSLIEQAEQT IDKAKADKLA KKLKKGKGFD LEDFRDQLQQ MKNMGGLGGL MDKLPSIGGV NLSQMGNAQG AAEKQFKQME AIINSMTPAE RRDPDLISGS RKRRIALGSG TQVQDIGRLI KQHKQMQKMM KKFSAKGGMA KMMRGLGGML PGGGMPKL
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