Gene Pput_4256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4256 
SymbolrplS 
ID5191427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4760346 
End bp4760696 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content58% 
IMG OID640588733 
Product50S ribosomal protein L19 
Protein accessionYP_001269564 
Protein GI148549462 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0335] Ribosomal protein L19 
TIGRFAM ID[TIGR01024] ribosomal protein L19, bacterial type 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACA AGATCATCCA GCAGCTCGAA GCCGAGCAGA TGAGCAAGGA AATCCCGACC 
TTCGCACCAG GCGACACCGT TGTCGTTCAG GTTAAAGTGA AGGAAGGTGA GCGTTCCCGT
CTGCAGGCGT TCGAAGGCGT TGTTATCGCC AAGCGTAACC GCGGTCTGAA CAGCGCCTTC
ACCGTGCGCA AGATCTCCAG CGGCGTTGGC GTAGAGCGTA CCTTCCAGAC CTACAGCCCG
CAAATCGACA GCCTGGCCGT GAAACGTCGT GGTGACGTGC GTAAAGCCAA GCTGTACTAC
CTGCGCGACC TGTCCGGCAA AGCCGCTCGC ATCAAGGAAA AACTGTCCTG A
 
Protein sequence
MTNKIIQQLE AEQMSKEIPT FAPGDTVVVQ VKVKEGERSR LQAFEGVVIA KRNRGLNSAF 
TVRKISSGVG VERTFQTYSP QIDSLAVKRR GDVRKAKLYY LRDLSGKAAR IKEKLS